KEGG   Porphyrobacter sp. YT40: E2E27_01025
Entry
E2E27_01025       CDS       T06153                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pot  Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:pot00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pot02044]
    E2E27_01025 (tssC)
Secretion system [BR:pot02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E2E27_01025 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 GCV_H
Other DBs
NCBI-ProteinID: QDH33039
LinkDB
Position
complement(210172..211659)
AA seq 495 aa
MASDPSKLDQAQVAETISVDDFAELIQRDFKPRDDQKRSQIEQAVQTLAQQALAGAVKMG
DDVFATIDGMISEIDRKLSDQMNAILHHPEFQALESAWRGLDYLVSKSETGQDLKVRVMN
IAESELSSMFKQYRGTLWDQSPLFKKIYESEFGQLGGTPFGAFICDMYFDHSSKDLNIMK
GLARIGAASHAPIISAADSNLLGMDSWTEVSDPRDLANRFDSSDHAAWNAFRSSDDSKYL
ALTMPRMLGRPTYSVKDNPIDAFEFDEVTDGEHDKHLWINAAYGLGVRINAAFREYGWCT
RIRGVESGGTLEDLPLSTFPTDDGGVDQKCPTEVAISDRREAELSELGLIPLIHRKGTTN
ATFIGSQTVHKPAKYDDPNATANAKLAARLPYLFASCRFAHYLKCMVRDWVGGTREGPQL
QADLSDWVHQYVTADPDSAGEETKARLPLKRAEVTVEPDPENPGYYKSRFLFVPHHQLEG
MDVSVSMVSQLPKGN
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggcatcggatccatcgaaactggatcaggcacaggtcgcagagaccatctcggtcgat
gattttgccgagcttatccagcgcgacttcaagccgcgcgacgatcagaagcgcagccag
atcgaacaggcggtgcagacgttggcgcagcaggcgctggcgggtgccgtcaagatgggg
gacgatgtcttcgccaccatcgacggcatgatctccgagatcgaccgcaagctctccgac
cagatgaatgcgatccttcaccatcccgaattccaggcgctggaatcggcatggcgcggg
ctcgattatctggtctccaagagcgagaccggacaggatctcaaggtgcgggtgatgaac
atcgccgaatccgagctgtcctcgatgttcaagcaatatcgcggcacgctgtgggaccag
agcccgctgttcaagaagatttacgaatccgaattcggccagctgggcggcacccccttc
ggggccttcatctgcgacatgtatttcgaccattcgtcgaaggatctcaacatcatgaag
ggcctcgcccggatcggtgcagcgagccatgcgccgatcatctcggcagcggattcgaac
ctgctgggcatggacagctggaccgaggtctccgatccgcgcgatctcgccaaccgtttc
gacagttccgaccacgcggcctggaacgccttccgcagctcggacgacagcaagtatctc
gcgctgacgatgccgcggatgctcgggcggccgacctattcggtcaaggacaacccgatc
gacgccttcgagttcgacgaagtgaccgatggcgagcacgacaagcacctgtggatcaac
gccgcctacgggctcggcgtgcggatcaacgccgccttccgcgaatatggctggtgcacg
cgcatccgcggggtggaatcgggcggtacgcttgaagatctgccgctctcgaccttcccg
accgacgatggcggggtcgaccagaagtgcccgaccgaagtcgcgatttcggaccggcgc
gaggcggagctgtcggagctcgggctgatcccgctgatccaccgcaagggcaccaccaac
gcgaccttcatcggctcgcagacggtgcacaagcccgccaagtacgacgatcccaacgcc
accgccaatgccaagctggcggcgcgtctgccctacctgttcgccagctgccgctttgcg
cactatctcaagtgcatggtgcgcgactgggttggtggcacgcgcgaggggccgcaactg
caggccgacctcagcgactgggtccaccaatatgtcacggccgatcctgattcggccggt
gaagaaaccaaggcgcgcctgccactgaagcgggccgaggtgacggttgaaccggatccc
gagaatccgggctattacaagagccgcttcctgtttgtgccgcaccaccagttggaaggc
atggatgtgagcgtcagcatggtgtcgcagctgcccaagggcaattga

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