KEGG   Porphyrobacter sp. YT40: E2E27_01075
Entry
E2E27_01075       CDS       T06153                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
pot  Porphyrobacter sp. YT40
Pathway
pot03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pot00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E2E27_01075 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pot02044]
    E2E27_01075 (tssM)
Secretion system [BR:pot02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E2E27_01075 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical LysE
Other DBs
NCBI-ProteinID: QDH33049
LinkDB
Position
complement(221872..225357)
AA seq 1161 aa
MKKFLTNWWTVSIGTMVLLALLLCLGLPLFVDALKPLWVRLTIAGLLVLAWLAWFLLRRR
AAKKAEAALAAELAGPDAAGEEAGAVQGRMAAALKQLREAGGGKRGYLYAQPWYVIIGPP
GAGKTTALMNSGLRFPLADRTLQGTGGTRNLDFLFAEEAVLVDTAGRYTTQDSDSAVDNA
GWKRLLELLRKHRPFEPVNGILVAIPADDLQRGDVRVIDNHAAIIRRRLREIREALQVEL
PVYLLITKADLLAGMTEYFADLDVDGRRAVIGHTFPAIATRLESADITAAFDEVTNDVAA
RQPKRLEEEKDIRRRGLILGFPAQLFALRPALFRLIEGAFLNEDRPSGRLRGFYLTSGTQ
DGSAIDRILQGVSKTYGSSAAAGGAQEGRAFFLNRLLQEVVFKEAGMPVSDPALERKRQR
QITAVGVALAAAVVLAVGLWTVSFLGNRGFQSDTLAAADTIKGEIDSSRLDLVRIGASDA
SLEQVLPLLDALRDLPEGYQAQADGGPSLFNRFGLFQSSLAQRNAEAYHIGLRRILLPRV
MLRLEDKMRAELADPLALYEPLKVYLMLGGAAPGRRIDPDTVRQHVAADWASEVFPGAEM
APVRERLALHLDALTNDPNISAGWAGGKAPLDGELVAAARTAVGSMSLSQRAFAILRAKT
AKPEEDFQMATLLQPGDAAAFADPDALLAIRVPYIFTRKGFEQSYAIARADVAQDLKNET
WVLGQTTGSIAGELSGMQQGISTIYAQEYIAQWKGVVGALKAADYFNNPQAFRALTKDPS
PLRTVLLEVRKNTNFKDPSPLDKAEKLALDKLKQTKVGKIGEKLASGSSASSADGEITMA
FADLNAWTGTGQAPGEIKTFIDTVRQTFSSVSASGQPGTGGSAAEALAPVLGELKTAATQ
APEIMQGFANGVVEGGSSSGVAVLQGEATLAYSQQVQPACEQAVGDKFPFQKAATTDAAV
GEVRATFGPGGLVPQFIQTRLDAYLDRSGEDWRWTEGDPVVASFSPATPKNMQKADALAL
TIGEGLPLRMELMQLGREANRVELSTGGVVLRFDLDDNKVQNLTWQFGGGMVQSSEVKII
ANGGIEGLGPPEQVAWKRPESGPWSLFRLLERARVRAVTDDTVEAEFNPGPARAVFRISF
PTDRNPFSGGGLWSVQCPQML
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgaagaagttcctgaccaactggtggaccgtttcgatcggcacgatggtgctgctcgcg
ctgctgctgtgccttggcctgccgctgttcgtcgacgcgctgaagccgctgtgggtgcgg
ctgacgatcgccgggctgctggtgctggcgtggctcgcgtggttcctgctgcgccgccgc
gccgcgaagaaggccgaggccgcgctcgctgccgagctggccgggcccgatgcggcgggc
gaagaggcaggtgcggtgcagggccggatggccgccgcgctcaagcaactccgcgaggcg
ggcgggggcaagcgcggctatctctatgcccagccgtggtatgtcatcatcgggccgccg
ggtgcgggcaagaccaccgcgctgatgaattccggcctgcgcttcccgctcgccgaccgc
acgctgcaaggcaccgggggcacgcgcaatctcgacttcctgttcgccgaggaagccgtg
ctggtcgatacggcgggtcgctacacgacgcaggacagcgacagtgcggtggacaatgcc
gggtggaagcgtctgctcgaactgctgcgtaagcaccgcccgttcgagccggtcaacggc
attctggtggcgatccctgcggacgatctgcaacgcggcgacgtgcgcgtgatcgacaat
cacgccgcgatcatccgccgccgcctgcgcgagatccgcgaggcgttgcaggtcgagctg
ccggtctacctgctcatcaccaaggccgacctgctggcgggcatgaccgaatatttcgct
gacctcgatgtcgacgggcggcgcgcggtgatcgggcacacctttccggcgatcgcgacc
cggctagagtcggcggacatcaccgcggctttcgacgaggtcaccaatgatgtcgccgcc
cgccagcccaagcggctggaggaggaaaaggacatccgccgccgaggcctgatcctcggc
ttcccggcccagctcttcgcgctgcgcccggcgctgttccgcctgatcgaaggcgccttc
ctcaacgaggatcgcccgagcgggcggctgcgcgggttctacctcacctcgggcacgcag
gatggcagcgcgatcgaccgcatcctgcaaggtgtcagcaagacctatggttcatctgcc
gcagcgggcggggcgcaggaaggccgtgcgtttttcctcaaccggctgctgcaggaagtg
gtgtttaaggaagccgggatgccggtttccgaccctgcgctggagcgcaagcgccagcgg
cagataacggcggtgggagtcgcacttgccgctgccgtggtgctggcggtggggctgtgg
acggtgagcttcctcggcaatcgcggctttcagtccgacacgctggcggcggccgacacg
atcaagggcgagatcgattcgagccgcctcgatctggtgaggatcggcgcgagcgatgct
tcgctcgaacaggtgctgccgctgctcgatgcgctgcgcgatctgcccgagggctatcag
gcgcaggccgatggcggcccgtcgctgttcaaccgcttcggcctgtttcagagcagcctc
gcccagcgcaatgccgaggcctatcacatcggtctgcgacgcattctcctgccacgcgtc
atgctgcggctggaagacaagatgcgcgctgagctggccgatccgctggcgctctacgaa
ccgctcaaggtctatctgatgctcggcggagctgcaccggggcggcggatcgatcccgac
acggtgcgccagcacgtcgccgccgactgggcgagcgaggtcttccccggcgcggaaatg
gcgcccgttcgcgagcggctggcgctgcatctcgatgctttgaccaatgaccccaacatt
tccgccggctgggcgggggggaaggctccgctcgatggcgagctggtggccgccgcgcgc
accgccgtgggcagcatgagcctgtcgcagcgggcctttgcaatcctgcgcgcgaagacc
gccaagccggaagaggacttccagatggcgactctgctgcaaccgggcgatgccgccgcc
ttcgccgatcccgatgcgctgctggcgatccgcgtgccctatatcttcacccgcaagggg
ttcgaacagtcctatgccatcgcccgcgcggacgtggcgcaggatctcaagaacgagacc
tgggtgctcggccagaccaccggcagcatcgcgggcgagttgagcgggatgcagcagggg
atctcgaccatctatgcgcaggaatatatcgcgcagtggaagggcgtggtgggcgcattg
aaggcggcggattacttcaacaatccgcaggccttccgcgcgctgaccaaggatccctcg
ccgctgcgcacggtgctgctggaggtgcgcaagaacaccaacttcaaggacccgagcccg
ctcgacaaggccgagaagctggcgctcgacaagctcaagcagaccaaggtcggcaagatc
ggcgaaaagttggcgagcgggagcagcgcgagttccgccgatggcgagatcacgatggcc
ttcgccgatctcaacgcctggaccggcaccgggcaggcgccgggcgagatcaagaccttc
atcgatacggtgcgccagaccttctcctcggtcagcgcgtcgggccagccggggacgggc
ggcagcgcggccgaggcgctggcgccggtgctgggcgaattgaagaccgccgcgacacag
gcccccgaaatcatgcagggctttgccaacggcgtggtcgagggcggcagttcctcgggc
gtggcggtgctgcagggcgaggcgacgctcgcctacagccagcaggtgcagccggcctgc
gagcaggcggtgggcgacaagttcccgttccagaaagccgccaccaccgatgccgcggta
ggcgaggtgcgcgcgaccttcggaccgggcgggctggtgccgcagttcatccagacccgg
ctcgacgcctatctcgaccgcagcggcgaggactggcgctggaccgagggtgatcccgtc
gtcgccagtttcagccccgccacgcccaagaacatgcagaaggcggacgcgctggcgctg
accatcggcgagggcctaccgctcaggatggagctcatgcaactcgggcgcgaggccaac
cgggtcgaattgagcaccggcggtgtggtgctgcgcttcgatctcgacgacaacaaggtg
cagaacctgacctggcagttcggcggcgggatggtgcaatcctccgaggtcaagatcatc
gccaatggcgggatcgaggggctcggcccgcccgagcaggtcgcctggaagcgccccgaa
agcgggccctggtcgctgtttcggttgctcgagcgtgcgcgcgtgcgcgcggtgaccgac
gataccgtcgaggccgaattcaatcccggcccggcgcgcgcggtgttccgcatttccttc
ccgaccgatcgcaaccctttcagcggcggcggcctgtggtcggtgcaatgtccgcagatg
ctttga

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