Porphyrobacter sp. YT40: E2E27_01850
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Entry
E2E27_01850 CDS
T06153
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2E27_01850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pot03400
]
E2E27_01850
Enzymes [BR:
pot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
E2E27_01850
DNA repair and recombination proteins [BR:
pot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E2E27_01850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QDH33187
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All DBs
Position
397335..398123
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AA seq
262 aa
AA seq
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MLSVATWNINSARLRVGLIEKLLTEAAPDILCLQEIKCESHLFPAEALANLGYTHQAVSG
QKGYHGVATVSRVPIREVTRHDWQDNGEARHIGVEVLGRDLLVENVYVPAGGDVPDREVN
PKFGQKLDFLGRMTRWADTLDRPTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEVETLG
KFRDAHGWVDLGREHIPAPQRYYSWWSYRNPGWQENDKGRRLDHMWASPEVARQARAHRV
IEEARAWTQPSDHVPLVTEFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgtcgccacctggaacatcaactcggcgcgcctgcgcgtcggcctcatcgaa
aagctgctcaccgaagccgcacccgacatcctgtgcctgcaggagatcaagtgcgagagc
cacctgttcccggccgaagcactggcgaatctcggctacacccatcaggcggtgagcggg
cagaagggctatcacggcgtcgccacggtcagccgcgtgccgatccgcgaagtcacccgc
cacgactggcaggacaatggcgaggcgcggcatatcggggtcgaggtgctgggccgcgat
ctgctggtcgagaatgtctatgtcccggccggcggcgacgtgcccgaccgcgaggtgaac
cccaaattcggccagaaactcgattttctcgggcgcatgacgcgctgggcggacacgctc
gaccggcccacgctgatcgtcggcgatttcaatatcgccccgctggaaagcgacgtgtgg
agccacaagcagcttctcaaggtcgtcagccacacgccgatcgaggtcgagacgctgggc
aagttccgcgacgcgcatggctgggtcgatctgggccgcgagcatatccccgcgccgcaa
cgctactattcgtggtggagctaccgcaatccgggctggcaggagaacgacaaggggcgc
cgcctggatcacatgtgggcctcgcccgaggtcgcccggcaagcccgcgcgcaccgcgtg
atcgaggaggcgcgcgcgtggacgcagccctccgatcacgtgccgctggtgacggagttc
gacctctga
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