Porphyrobacter sp. YT40: E2E27_02385
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Entry
E2E27_02385 CDS
T06153
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E2E27_02385
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pot01007
]
E2E27_02385
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pot03016
]
E2E27_02385
Enzymes [BR:
pot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
E2E27_02385
Amino acid related enzymes [BR:
pot01007
]
Aminoacyl-tRNA synthetase
Class II (U)
E2E27_02385
Transfer RNA biogenesis [BR:
pot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
E2E27_02385
Prokaryotic type
E2E27_02385
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
QDH33282
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All DBs
Position
complement(512072..514459)
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AA seq
795 aa
AA seq
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MKFSLTWLKDHLETTATVAEICDALNAIGLEVEGVEDPAEKLAGFRVAHVLTAARHPDAD
KLQVLTVDTGEGDPLQVVCGAPNARAGMKGVLGLPGAVVPANGMVLRKSAIRGVESNGMM
CSVRELELGEDHDGIIELPEDAPVGSDFASYHGAAPVIEVAVTPNRPDCMGVYGIARDLA
AKGLGTLKPIAMPAFTAEGACPVEIRTDDAQGCPAFYGRVIKGVTNGPSPDWLQQRLKSA
GQRPISLLVDLTNYLMLGFGRPAHVYDLAKLQGAVVARRAKDGEEVLALNEKTYTLDSEM
VVIADESQVHDIAGIMGGEHSGVQDDTTDVLLEIAYFDPARIGATGRKLGLSSDARTRFE
RGVDPEFLDQGLDLLTGLIVELAGGTASEVVRAGSPPSDAKVIGFDPGLTARLGGVEVVE
GEQKRILESLGFTVSADWQVTCPLRRHDIEGPADLVEEVVRIHGLDKVASVALPRAEGVA
RPTATPQQKLERGLRRAAAASGLNEAVTWSFLPTWAAEHFASDQPLWTLANPISEDMKAM
RPSLLPGLLMAAKRNADRGASSSRLFEIGRRYFRGSNGLSDEKPTLGIVLAGEKTPRGWQ
SGKAQAFDAYDAKALALALLEAAGAPVANLMVMGEAGPQFHPGQSATLRLGPKTVLARFG
MVHPATLKAFDADGPIAAVELFLDAIPPKKNAAFARPGFTPPALQAVTRDFAFLVPASLP
AGDLVRAVQGADKASITGVRVFDVFAGQGVPEGQKSIALEVTLQPGEASFKDAELKAIAE
KVVAAAAKLGGSLRG
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctcgctgacctggctcaaggaccacctcgagaccaccgccaccgttgcggaa
atctgcgacgcgctcaacgcgatcgggctcgaggtcgagggcgtggaggatccggcagaa
aagctcgccgggttccgtgtcgctcacgtgctcaccgccgcgcgccatcccgatgccgac
aagctgcaggtgctcaccgtcgacacgggcgagggcgatccgctgcaggtcgtctgcggc
gcgcccaatgcgcgtgctgggatgaagggcgtgctgggcctccccggcgcggtggtgccc
gccaacggtatggtgcttcgcaagagcgcgatccgcggggtcgaatcgaacggcatgatg
tgttcggtgcgcgagctggagctgggcgaggatcacgacgggatcatcgaattgcccgaa
gacgcgccggtcggcagcgatttcgccagctatcacggcgccgcgccggtgatcgaggtg
gcggtgacgccgaaccgccccgactgcatgggcgtctacggcatcgcccgcgatctggcg
gccaaggggctgggcacgctgaagccgatcgcgatgcccgccttcacggctgagggtgcg
tgtccggtggaaatccgcaccgacgacgcgcaaggctgccctgccttctacggccgcgtg
atcaagggtgtgaccaacggcccctcgcccgactggctgcaacagcggctcaagagcgcg
ggccagcgcccgatctccttgctggtcgatctgaccaactacctgatgctcggcttcgga
cgtccggcgcacgtctatgaccttgccaagctgcagggcgcggtcgttgcgcggcgcgcc
aaggacggcgaggaggtgctggcgctcaacgagaagacctacacgctggacagcgaaatg
gtcgtgatcgcggatgagagccaagtgcacgacatcgccgggatcatgggcggcgagcat
tcgggggtgcaggacgacaccaccgacgtgctgctcgaaatcgcttacttcgatccggcg
cgcattggcgcgaccgggcgcaagctggggctgtcgagcgacgcgcgcacgcggttcgag
cgcggggtggatcccgagtttctcgatcagggcctcgatctgctcaccgggctgatcgtc
gaactggcgggcggcacggcgagcgaagtcgtccgcgcgggatcgccgccgtctgacgcc
aaggttatcggcttcgatcccggcctgactgcgcgtctcggcggtgtcgaggtggtcgag
ggcgagcagaagcgcatcctcgaaagccttggcttcaccgtcagcgccgattggcaggtc
acttgcccgctgcgccgccacgacatcgaaggccctgccgatctggtcgaggaagtcgtg
cgcatccacgggctcgacaaggtcgccagcgttgccttgccgcgtgcggaaggcgtcgcc
cgccccactgccaccccgcagcagaagctcgagcgcggcctgcgccgtgccgccgccgcc
agcgggctgaacgaggcggtgacgtggagcttcctccccacttgggcggcggaacacttc
gccagcgatcagccattgtggacgctcgccaatccgatcagcgaggacatgaaggcgatg
cgcccctcgctgctgccgggcctcttgatggcggccaagcgcaatgccgatcgcggcgcg
tcctcctcccgcctgttcgagatcgggcggcgctatttccgcgggagcaatggtctcagc
gacgagaagccgacgctcggcatcgtgcttgcgggcgagaagaccccgcgcggatggcaa
agcggcaaggcgcaggccttcgacgcctatgacgccaaggcgctggcgctcgcattgctc
gaagcggcgggcgcgcctgtcgcgaacctgatggtgatgggggaggcggggccgcaattc
catcccggccagtcggccaccttgcgcctcggccccaaaaccgtgctcgcgcgcttcggg
atggtgcatcccgcgacgctcaaggccttcgacgccgacgggccgattgcggcggtggag
ctgttcctcgacgcgatcccgccgaagaagaacgccgctttcgcccgccccggcttcacc
ccgcctgcgctgcaggccgtgacccgcgacttcgccttcctcgtccccgcttcgctgcca
gcgggcgatctggtgcgcgcagtccaaggcgcggacaaggcgagcatcaccggcgtgcgc
gtgtttgacgtcttcgcggggcaaggcgtgcccgaagggcagaagtccatcgcgctcgaa
gtcacgctccagccgggcgaggcgagtttcaaggatgccgagctcaaagctatcgccgaa
aaggtagtggcggctgcggccaagctgggtgggagtctgcgcggatga
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