Porphyrobacter sp. YT40: E2E27_03375
Help
Entry
E2E27_03375 CDS
T06153
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
pot
Porphyrobacter sp. YT40
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QDH33462
LinkDB
All DBs
Position
complement(701844..703442)
Genome browser
AA seq
532 aa
AA seq
DB search
MEEFAALLDALVYTTSRNRKLALIAAYLRGSPDPDRGWAMAALTGGLDFPAVKSSTIRNL
MMERVDPVLWALSRDFVGDTAETASLLWPEPEDAAPQPALSLSEVVDRLAALTRATAPKE
LPGLLGRMDAKGRYALIKLATGGMRVGVSARLAKTAFAMAFEVPVEEVEEYWHALSPPYT
ELFQWAAEGGDPPDLAGVPRFRPFMLAHPLEDGVVDLKDYAAEWKWDGIRVQLVRAGGET
RVYSRSGDDISATFPELLDVLAMDAVLDGELLVRGVTQGGEAGGAASFNALQQRLGRKTV
SKAMLRDYPAFVRLYDVLLLDGTDWREQPWKSRRATLEGLMPRLPESHFDLSQLVEAPDF
AALSAIRDTARDEAIEGLMLKHRDSPYVAGRRVGHWFKWKRDPLLIDCVMMYAQRGSGKR
SSFYSDYTFGCWDGDPDVGAELLPVGKAYSGFTDAELKKLDKFVRQNTLNRFGPVREVKR
ELVFEVAFDSVHTSKRHKSGLAMRFPRIHRIRWDKPAHEADRIESLRALIKD
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatttgccgccctgctcgatgcgctggtctacaccaccagccgcaaccgcaaa
ctggcgctgattgcggcctatctgcgtggaagccccgatcccgatcgcggctgggcgatg
gccgcgctgaccggcgggctcgattttccggcggtgaagtcctccacgatccgcaatctg
atgatggagcgggtcgatccggtgctgtgggcgctctcccgcgatttcgttggcgacacc
gccgaaaccgccagcctgctctggcccgagcccgaagatgccgcgccgcagcctgcgctc
tcgctctccgaggtggtcgatcgccttgccgcgctcactcgcgccaccgcgcccaaggaa
ctgcccgggctgctcgggcggatggacgccaagggccgctatgcgctgatcaagctggcg
accggcgggatgcgcgtgggcgtatcggcgcgactcgccaagactgcctttgcgatggcc
ttcgaggtgccggtcgaggaggtcgaggaatattggcacgcgctcagcccgccctacacc
gaactgttccaatgggcggccgaaggcggcgacccacccgatctggcgggcgtgccccgg
ttccgccccttcatgctcgcccacccgctcgaggacggggtggtggacctcaaggactat
gccgccgaatggaagtgggacggcatccgcgtgcaattggtgcgcgcggggggggaaacg
cgggtctattcgcgctcgggcgacgatatttcggcgacctttcccgaattgctcgacgtg
ctggcgatggacgcggtgctcgatggcgaattgctggtgcgcggggttacgcagggcgga
gaggccgggggtgcggcgagcttcaatgcgctccagcagcggctcgggcgcaagaccgtc
tccaaggcgatgctgcgcgactaccccgccttcgtgcggctctacgacgtactgctgctc
gacggcaccgactggcgcgagcagccgtggaagtcgcgccgcgcaactttggaaggcctg
atgccgcgcctgccggagagccatttcgatctctcccagctggtcgaggcccccgatttc
gccgcgctctccgccatccgcgacaccgcgcgcgacgaggcgatcgaggggctgatgctc
aagcaccgcgacagcccttacgtggccggtcggcgcgtcgggcactggttcaagtggaag
cgcgatccgctgctgatcgactgcgtgatgatgtatgcccagcgcggcagcggcaagcga
tcgagcttctattcggactacaccttcggctgctgggacggcgaccccgatgtgggcgcg
gagctgctcccggtcggcaaggcctattcgggcttcaccgatgcggagttgaagaagctc
gacaaattcgtgcggcagaacacgctcaaccgcttcggcccggtgcgcgaggtgaagcgc
gagctggtgttcgaagtcgccttcgattcggtccacaccagcaagcgccacaagagcggc
ctcgcgatgcgcttcccccgcatccaccgcatccgctgggacaagcccgcgcacgaggcg
gatcggatcgagagtttgcgagcattgataaaggactga
DBGET
integrated database retrieval system
