Porphyrobacter sp. YT40: E2E27_04310
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Entry
E2E27_04310 CDS
T06153
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2E27_04310 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pot03019
]
E2E27_04310 (groL)
03110 Chaperones and folding catalysts [BR:
pot03110
]
E2E27_04310 (groL)
03029 Mitochondrial biogenesis [BR:
pot03029
]
E2E27_04310 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pot04147
]
E2E27_04310 (groL)
Enzymes [BR:
pot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E2E27_04310 (groL)
Messenger RNA biogenesis [BR:
pot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E2E27_04310 (groL)
Chaperones and folding catalysts [BR:
pot03110
]
Heat shock proteins
HSP60 / Chaperonin
E2E27_04310 (groL)
Mitochondrial biogenesis [BR:
pot03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E2E27_04310 (groL)
Exosome [BR:
pot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E2E27_04310 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E2E27_04310 (groL)
Exosomal proteins of breast cancer cells
E2E27_04310 (groL)
Exosomal proteins of colorectal cancer cells
E2E27_04310 (groL)
Exosomal proteins of bladder cancer cells
E2E27_04310 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QDH33628
LinkDB
All DBs
Position
complement(898059..899690)
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKDVKFGREAREGILRGVDILANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKYENMGAQMLREVASKANDSAGDGTTTATVLAQAIVNEGMKSVAAGMNPMDLKRGI
DQAVNAVVENLKGRSKDVSGSEEIAQVGIISANGDREVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPDKMTVELDNPYILIHEKKLSNLQSMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLQDIAILTKGEM
ISEDLGIKLENVTVGMLGQAKKVTIDKDNTTIVDGAGSADDIKARVAEIRTQIDNTSSDY
DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALEGLKGANEDQTRGIDIIRKAITAPIKQIAQNAGHDGAVVAGNLLRENDETQGFN
ASTDTYENLVKAGVIDPTKVVRTALQDAASVAGLLITTEAAIVERPEDKPAAPAMPDMGG
MGF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaggacgtgaagttcggccgcgaagcccgtgaaggcattctgcgcggcgtc
gatatcctcgccaacgccgtcaaggtgacgctcggccccaagggtcgcaatgtcgtcatc
gacaagagcttcggtgccccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gagctcaaggacaagtacgagaacatgggcgcgcagatgctgcgcgaagtcgccagcaag
gcgaacgacagcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgatcgtc
aacgaaggcatgaagtcggttgcggccggcatgaacccgatggatctgaagcgcggcatc
gatcaggcggtcaatgccgtggtcgagaacctcaagggccgttcgaaggacgtctcgggc
tcggaagaaatcgcgcaggtcggcatcatctcggccaacggcgaccgtgaagtcggcgag
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtgatcaccgtcgaggaagcc
aagggcctcgagttcgagctcgatgtcgtcgaaggcatgcagttcgaccgcggctacctc
tcgccctacttcatcaccaaccccgacaagatgaccgtggaactggataacccctatatc
ctgatccacgagaagaagctgtcgaacctgcagtcgatgctgccgatcctcgaagccgtg
gtgcagtcgggccgtccgctgctgatcattgccgaggacatcgaaggcgaagcgctcgcg
accctcgtggtcaacaagctgcgcggcggcctgaaggttgcggcggtcaaggctccgggc
ttcggcgatcgtcgcaaggcgatgctgcaggacatcgcgatcctgaccaagggcgagatg
atcagcgaagacctcggcatcaagctcgagaacgtcaccgtcggcatgctcggccaggcc
aagaaggtcaccatcgacaaggacaacaccaccatcgtcgatggcgccggttcggctgac
gacatcaaggcgcgcgtcgccgagatccgcacccagatcgacaacacctcgtccgactac
gaccgcgagaagctgcaggaacgccttgccaagctcgctggcggcgtggccgtaatcaag
gtcggcggtgcgaccgaagtcgaagtgaaggagcgcaaggaccgcgtcgatgacgctctc
cacgcgacccgcgctgcggtcgaagaaggcatcgtcccgggcggcggtaccgcgctgctc
tacgccaccaaggctctcgaagggctgaagggcgcgaacgaagaccagacgcgtggtatc
gacatcatccgcaaggcgatcaccgccccgatcaagcagatcgcccagaatgccggccac
gatggcgcggtcgtcgcgggcaacctgctgcgcgagaatgacgagacccagggcttcaac
gcttcgaccgacacctacgaaaacctggtgaaggccggcgtgatcgacccgaccaaggtc
gttcgcaccgccctgcaggatgcggcctcggtcgctggcctgctgatcaccaccgaagcg
gcgatcgtcgagcgtccggaagacaagccggctgcgcccgccatgcccgacatgggcggg
atgggcttctaa
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