Porphyrobacter sp. YT40: E2E27_05930
Help
Entry
E2E27_05930 CDS
T06153
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pot03036
]
E2E27_05930
Chromosome and associated proteins [BR:
pot03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
E2E27_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
Motif
Other DBs
NCBI-ProteinID:
QDH33911
LinkDB
All DBs
Position
complement(1256588..1260835)
Genome browser
AA seq
1415 aa
AA seq
DB search
MFQSDLFPAGEQLSSVPLAYAVGARIAALLASGRHLARADISRLFADETGALDWGSAWTI
DDYNNAVEIGALLWLRESSRIDLATSVHEAEARLDWLEAALPPRLVRSEGQVELQQFSTP
PMLTWMMAKAAALSARDTLLEPSAGNGALALWGSVQNASLVLNEIDPARQDALSLIFPSA
TITAHDGELIADLHRGPGPSVVMMNPPFARSRERGKDGKTAQRHLRSAIRTVANGARIVA
IMPEGFDAPTFAKAQNEAALLLDVRLQQIFRHTGTGVAVRLAVFDKTPTASSPAIAGDTA
DLVALHELLNALPPRVHTSASPRRLPIGKPVCLVGKTSTPRPPVRPLAPFAATPAVTANA
INLAYSVLADPAPVPEQTGIYLPYRPSRIAFEDAPVHPTPLVESVAMGSVAAPQPDVIPR
LPAGWHAGGLLSEAQCETLVYAAQAFARDLPGRFKVSQEGTSLELSEDGRSYRQGFFLGD
GTGAGKGRQIAAVIMDRWLAGERRHVWITKNEALLEDARRDWEALGGLPLDLQPLSRWKL
GQPVTMPEGILFVTYPTLRSGRAEDTRLDQLLAWVGEDYDGVIAFDEAHAMANALGGSSI
RGKVKGSEQGIAGLRLQNHLPRARVLYASATGASDIANLGYTTRLGLWGPETAFPTHETF
MTEIRAGGVAAMELVARDLKAQGLYLARALSFAGVEYEILEHSLTDAQVKIYDAYADAWA
IIHRNLEAALEATRVVDEDSGDTLNRNAKAAALSIFEGTKQRFFAQLLLSMKLPSLIPAM
EAALGENHSIVVQLVSTAEAMLDRRLADLSDEEREALDIDLSPREYVVDYLAKGFPVRLM
QVFADEDGNLRSEAMSDMEGNPIFCPRAVAARDALIEQLCALPPIATALDAIIEHFGTDA
VAEVTGRTRRLVLGRDGEQRLERRSPSANVAEAQSFMEGTKRILVFSDAGGTGRSYHADL
GARNQQRRVHFLLEPGWRADNAIQGLGRTNRTNQASAPLFRPVTTDVKGERRFISTIARR
LDALGALTRGQRQTGGQNLFDPADNLESDYARNALSRWFQMLYDGKLEATSFGNFVERTG
LRLENSDGGLTDNLPTIQRWLNRILALPIALQNAIFEEYLGLVEARIEAAREAGTFDQGL
ETVRVDSFEVLADELLRTDPVTGAETRLVSLDVSRHLRPLRLQRLARMHEIGSTHAIPMR
NARSGKVALSVPARRLIADDGAVIERRRLLRPLKSANWTLEALAESHWEEVGVTAFTSAW
RDEEEEAAASPLTERAHLATGLLLPVWKRLPGDHVRVTRLVAKDGQSIIGREVLDVDLAA
IAETFGLSGVTGPSAEQIGDLVLASGKPLGLASHDPLTVKRSLVGGEQRLELTGFSPDRL
DWYKNKGCFTEIIRYRTRLFVPVSRASEILVGLGV
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaatcagacctgtttccagccggcgagcagttgtcctcagtgccattggcttac
gccgtcggcgccaggattgccgcgcttctcgcttcgggacgtcaccttgcccgcgccgac
atttcccggctgttcgccgacgagaccggcgccctggactggggaagcgcctggaccatc
gatgattacaacaacgcggtcgagatcggcgcactgctctggcttcgcgagtcctcgcgc
atcgacctggcgacaagcgtgcacgaagcagaagcgcgtttggactggctggaagcagcc
ttgccgccgcggctcgttcgcagcgaaggacaggtcgagctgcagcagttctcgaccccg
ccaatgctcacctggatgatggcaaaggctgcggctctctccgcgcgcgacacgctgctc
gagccgtccgcaggcaatggcgctcttgctctttggggcagcgtccagaacgcctcgctg
gtcctcaacgagatcgatccggcaagacaagacgccctgagcctgatcttcccttcggcc
accatcactgcgcatgacggggaactgatcgccgaccttcatcgcggcccaggtccgtcg
gtcgtaatgatgaacccgccgttcgcgcgcagccgggaacgcggcaaggatggcaagacg
gcgcagcgccacctgcggagcgcgatccggaccgttgccaatggggcaaggattgtcgcc
atcatgcccgaaggcttcgacgctcccaccttcgccaaggcacaaaacgaagcggcgctg
ctcctcgatgtgcgcctgcaacagatatttcgccatacagggacaggggtcgcggttcgc
ctggccgtgttcgacaagacgccgactgcgtcctcgcccgcgatcgccggagatacggcc
gacctggtcgcgctccacgagctgctcaacgcgcttccgccacgcgtacacacctccgcc
agcccccgtcgcctgccaatcgggaagccagtctgcctcgttggcaagacctctactcct
cgcccgccggtccggccgttggcgccgttcgctgcgacaccagcagtcacagcgaatgcg
atcaatcttgcctattcggtcttggccgatccagcgccagtgcccgaacagaccggcatc
tacctgccttaccggccaagccgcatcgcgttcgaggatgcgccggtccatcctaccccg
ctcgtggagtcggtcgccatgggttcggtcgcggcgcctcagccggacgtcattccgcgc
cttcccgcaggttggcacgccggtggcctgttgtccgaagcgcaatgcgagacactggtc
tatgctgcccaggcattcgcacgcgatcttccgggtcgcttcaaagtcagccaggaaggc
acctcgctggaactgtccgaggatgggcgctcctaccgccaaggcttcttcctcggcgat
ggcaccggagcgggcaagggacggcagatcgcagcggtcatcatggaccgctggctcgcc
ggcgagcgccgccatgtctggatcaccaagaacgaggcgctcctcgaagatgcgcggcgc
gactgggaagcgctcggcgggctgccgctcgatctccagccgctctcgcgctggaaactc
ggccaacccgtgacgatgcccgaaggcattctcttcgtgacctatccgacgctgcgctcg
gggcgcgccgaggatacgcggcttgaccagctccttgcctgggtgggcgaggactacgac
ggcgtgatcgccttcgacgaagcccatgcgatggccaatgcgctcgggggctcttcaatc
cgcggcaaggtcaagggctccgaacagggtatcgcgggccttaggctccagaaccatttg
ccgcgcgcccgcgtgctttacgcgtctgccacgggcgcctcggacattgccaatcttggc
tacaccactcggctcggcctgtggggacctgagaccgctttcccgacacatgaaaccttc
atgaccgaaatccgcgctggcggcgttgcggcgatggagctcgtcgcccgcgacctcaag
gcccaggggctctaccttgcccgtgcgctttccttcgccggggtggagtacgagatcctc
gagcacagcctgaccgacgcgcaggtgaaaatctatgacgcctatgccgatgcgtgggca
atcattcaccgcaatctggaggccgcgctcgaagcaacccgggtggtcgacgaagacagc
ggcgatacgctcaatcggaacgccaaggcggcagcgctgtcgatcttcgaaggcaccaag
cagcgcttctttgcccagctcctgctttcgatgaaactgccgagcctgatccccgcgatg
gaagcagcgcttggcgagaaccattcgatcgtggtgcagctggtctcgaccgccgaggcc
atgctcgaccggcgtctcgccgacctctccgacgaggaacgcgaagcgctcgatatcgat
ctctccccgcgcgaatacgtcgtcgactacctcgccaagggctttccggtacgcctgatg
caggtcttcgccgacgaggacggcaatcttcgctccgaggcgatgagcgacatggaaggc
aatccaatcttctgcccgcgcgccgtggctgcgcgcgatgcgctgatcgaacagctttgc
gcactgccgcccatcgccactgcgctcgatgcgattatcgaacatttcggaaccgacgcc
gtggctgaggtgacgggccggacccgcaggcttgtcctgggccgcgatggtgagcagcgc
ctcgaacggcgtagccccagtgccaatgtcgccgaagcgcaaagcttcatggaaggcacc
aagcgcatcctggtcttttcggatgcgggcggcacggggcgatcctatcatgccgacttg
ggtgccaggaaccagcagcgccgggtgcatttcctgctcgagccgggctggcgcgccgac
aacgccatccagggtctcggtcgtaccaaccgcaccaaccaggcctcggccccgctgttc
cgcccggtaaccaccgacgtgaagggcgagcgccgcttcatctcgaccattgcgcgaagg
ctcgatgccttgggcgcgctgacgcgcggtcagcgccagaccggcggacagaacctgttc
gacccggcagacaatcttgaaagcgactatgcgcgcaacgcgctcagccgctggttccag
atgctctatgacggcaagcttgaggccacgagcttcggcaacttcgtcgagcgaaccggc
ctccgtctcgaaaactccgatggcgggctgaccgacaatctcccgacgatccagcgctgg
ctcaaccgcattctcgcgctgccgatcgcgctgcagaacgcgatcttcgaggaatacctt
ggcctcgttgaagcgcggattgaagctgcgcgcgaggccggaacgtttgaccagggactg
gaaaccgtcagggtcgatagtttcgaggtcctcgccgacgaactcctgcgaaccgatccc
gtgaccggagccgagacccgtcttgtctcgctcgacgtgtcgagacaccttcggcctcta
cgcttgcagcgcctggcgcggatgcacgagatcggcagcacgcacgcgatcccgatgcgc
aacgcacgctcgggcaaggtcgcgctgtcggttcctgcccggcgcctcatcgccgacgat
ggggccgtgatcgaacgccggcgcctgctgcgcccgctcaagtccgccaactggacgctt
gaggcgcttgctgaaagccactgggaggaggtgggcgtcactgcgttcacgagcgcctgg
cgggacgaggaagaagaggccgctgcttcaccgctcaccgagcgcgcccatcttgccacc
ggactgctgctccctgtttggaagcgccttcccggcgatcatgtccgcgtcacccggctc
gttgctaaggacggccagtcgatcatcgggcgcgaagtgctcgatgtcgatctcgctgca
atcgccgagacctttggcctttccggagttaccggaccatcggcagagcagatcggcgac
ctcgtcctcgccagcggcaaaccgctgggccttgcgagccacgatcccctcaccgtcaag
cgttcgctggttggcggcgaacagcgccttgaactgaccggattctcgcccgatcggctc
gactggtacaagaacaagggctgcttcaccgagattatccgttaccgcacgcggctgttt
gtcccggtgtcgagagcctctgagatccttgttgggctcggcgtctag
DBGET
integrated database retrieval system
