Porphyrobacter sp. YT40: E2E27_05990
Help
Entry
E2E27_05990 CDS
T06153
Name
(GenBank) PAS domain S-box protein
Organism
pot
Porphyrobacter sp. YT40
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
HATPase_c
PAS_4
PAS_8
Response_reg
HisKA
PAS_9
MASE1
PAS_3
PAS_7
Hpt
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QDH33922
LinkDB
All DBs
Position
complement(1276108..1279650)
Genome browser
AA seq
1180 aa
AA seq
DB search
MEKPIGPPLHTPLMRGARGFISLPVVGAIFAILGYLGVNLTLETGRIAAFWIGNALVIGL
LLGRRPAYQMTVVAVCFLANVLSNFAIGDTAEVAFGLASANLLEITLAIYVLQRFVLRSQ
TFDTLLDFAKLAGISVLIPFGPAVVAATVFANVSGADFATTVVQWLAAHCLPIPIFGSMV
LIVRQTIRSDQPLDGATARKWAAVLVAVAIAVPAIFAQSTFPFLFLAAPVVIFAAFQTGR
LGTTIVVAIIAVAATAATILDSGPISLVRGGPREEVIALQVFLASCLSVGLPVAVVLANR
AKIRAELKESRDFVNTILDGIGDLVFRVDADWRFTYLNRRWQELTGYSSAQLLGETPFER
LLDNSAFDFNRQRIAIETGRAGKDKHIVQTRTVDGRTLQIAIGLEAQFDADGSFVGAIGT
GTDVTESIARSHALAESEARFRKLAEAAPVGIFQADSSGNITYVNSVWLKRFGLEREAML
GDGWKSALATGEEYEDDPAFTGFHKPGEGRRRIIRFRDRDGEDLWCETVNAAEFDEAGNI
SGYVGVLHDITARKQAQDQLAEREAQLALLADNATDAVLRLDLDGTCTYASPSAEQIFGI
DHSLLIGQQFITGFHADDQQRVQSEFDGLAAGQRDQVRIAFRSESLLRRSTFHWLEANCG
LVRDPETSEPRNIIASLRNIDETKRLEAALLEAKERAEAAVEAKSTFLANMSHEIRTPMN
GVIGFTELALSGDLDEEQRQNLEMIAESGRAMMRLLNDLLDFAKIEAGQMSLASEPTDIR
HKLQGALRIMEPVAVRKGLALRMTVEDDVPEWVVSDPLRLRQIMLNLVGNALKFTETGSV
CVHVSHSKSTQHLTIEVIDTGIGIPSDQIDNVFEKFTQADSSIARRFGGTGLGLPICSQL
AGLLGGSLRAESEVGVGSRFILTLPSVECDAPPRTEAPTTLDAPSGAALSLRVLVAEDNQ
INQQLTMAMLRKAGCTASLAEDGAEAIAMIAERHGTGEAFDIVLMDMQMPNLDGLQATRK
IRAAGIGPDTLPIIALTANAYQEDVDACRDAGMQAHLTKPLRLRDLQGVLRLWARRGSTE
ASIDPAEESDALETDPRLQALYRERKQRALELVDGLLAQPGLEGTTIAKLASELHQIAGI
AAFFGQAQLGEESQRLERELQGADGDKLDLLVRARALLAA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcccattggcccccctttgcacacacccctgatgcggggcgctcgcggtttc
atcagcttgccagtcgtgggggcgatcttcgccatcctcggttacctcggagtcaatctg
accctcgaaacaggtcgcatcgcggcgttctggatcggcaacgcactggtcatcggctta
ttgctggggcggcggccggcttatcagatgacagtggtggccgtgtgctttctggccaac
gtcctgtccaatttcgccattggcgacacggcggaggtcgcgttcggcctcgcgagtgca
aatttgctggaaatcacgctcgccatttacgtcttgcaacggttcgtgctgcgcagtcag
acgttcgataccctgcttgatttcgccaagctggctggcatcagcgtcttgatcccgttt
ggccctgccgtggtcgctgctaccgtgttcgccaatgtaagcggagcggactttgcgacg
acggtcgttcaatggcttgcagcacattgtctgccgatcccgatcttcgggtcgatggtc
ttgattgtgagacaaacgatccggtccgatcaacctttggacggtgcgacagcccgcaag
tgggcagcggtactcgttgcagtggcaatcgccgttccggcgatcttcgcccaaagcacg
tttccattcctgtttctggccgctccggtcgtgattttcgcagcgttccagacgggccga
ctgggaaccaccattgtcgttgcgatcattgccgtcgccgccactgctgcgaccatactc
gatagcggcccgatctccctcgtccggggcggaccgcgcgaggaagtgatcgccttgcag
gtcttccttgcctcttgcctttcggtcggtcttccggtggccgtggtgctggccaatcgg
gccaagatccgggccgagctcaaggaaagccgggatttcgtcaacacgatcctcgatggc
atcggcgaccttgttttcagggtcgatgcggactggcgtttcacctacctcaatcgccgc
tggcaggagctgaccggttattcgagcgcccagttgctcggagaaacccccttcgagcgg
ctgctcgacaattccgccttcgacttcaatcggcagcggatcgccatcgaaactggccgc
gccggcaaggacaagcatattgtccagacgcgtacggtcgatggccgcacactccagatt
gcgatcgggttggaagcccagttcgacgcggacggatcattcgttggcgcgatcggaacc
ggaaccgacgtcaccgagagcatcgcccgcagccacgcgctcgcggaaagtgaagcgcgc
ttccgcaagctggccgaagctgcgccggtcgggatcttccaggctgattcgagcggcaac
atcacctacgtcaattcagtgtggctcaagcgcttcggcctcgaacgcgaggccatgttg
ggtgacggatggaaatccgccctcgcgaccggcgaggaatacgaagacgatccggccttc
accgggttccacaaacccggtgaaggccggcgccgtatcatcaggttccgcgatcgcgac
ggcgaggatctctggtgcgaaacggtcaacgcagcggagttcgacgaagcgggcaatatc
tccggttatgtcggggttttgcacgacatcaccgcgcgcaaacaggcgcaggaccagctg
gccgagcgcgaagcccagctcgctctgctggcggacaatgccaccgacgccgtgcttcgg
ctggatctggacgggacgtgcacctatgcctcgccgtccgcggagcagattttcggcatc
gatcacagtttgctgattggacagcagttcatcaccggctttcacgccgacgatcagcaa
cgcgttcagagcgagttcgatgggttggcagcgggccagcgcgatcaggtacgtatcgcg
ttccgttccgaaagcctgctccgccgcagcacctttcactggctcgaagccaattgcggc
ctcgtgcgcgacccggagaccagcgagccccggaatatcatcgcgtcgctgcgcaacatc
gatgagacgaagcggctggaggctgcgttgctcgaagcgaaggaaagggcagaagcggcg
gtcgaagccaaatcgaccttccttgccaacatgagccatgaaatccgcacgccgatgaac
ggcgtgatcggctttaccgagcttgcgctttcaggcgaccttgacgaggagcagcggcag
aatcttgaaatgatcgcggaatcaggccgggcaatgatgcgccttctcaacgatttgctc
gatttcgcgaagatcgaagccggtcagatgagcctggcgtccgaaccgaccgacatacgt
cacaagctgcaaggcgccctgaggatcatggagccggtcgccgttcgcaaggggctggcg
ctgcggatgacggtcgaggacgatgttcccgaatgggtggtttctgacccgctgcgtctg
cgccagatcatgctcaacctcgtcggcaatgcgctgaagtttaccgagacgggatcggtt
tgcgtccatgtctcccacagcaagtcgacgcagcacctgacgatcgaggtcattgacact
gggatcggaattccatccgatcagatcgacaacgtgttcgaaaagttcactcaggcggac
tcgagcattgcccgccggtttggcggaaccggacttggcttgccgatctgttcccagctg
gcaggcttgctcggcggttcgttgcgagcggagagcgaggtcggcgtcggatcgcgtttc
attctcacacttccatccgttgaatgcgatgcgcctccgaggactgaagcgccgacaacg
ctggatgcaccctcgggcgcagccctgtcgctgcgtgtgttggttgccgaagacaaccaa
atcaaccagcagctgaccatggccatgctgagaaaagcgggatgcaccgcctctctcgcg
gaagacggtgccgaggccattgctatgatcgccgagcgccacggcaccggcgaggctttc
gatatcgtgttgatggacatgcagatgcccaacctcgatggcttgcaggcaacccggaaa
atccgcgctgccgggattgggcccgatacgcttccgatcattgcgctgaccgccaatgcc
tatcaggaagacgtcgatgcgtgccgcgatgcggggatgcaggcgcatctgacaaagccg
ctgcggcttcgcgatctgcagggggtgctgcgcttatgggccagacggggaagcaccgaa
gcgagcatcgaccctgccgaggaaagcgatgcgctggagaccgatccgcggcttcaggcg
ctctaccgcgaacgcaagcagcgcgcgctggagctcgtcgacggattgctagcgcagccc
ggacttgagggcacgacgatcgccaagcttgcctcggaactgcatcagattgccggcatc
gccgccttcttcggacaggcgcagcttggcgaggaaagccagcggctggaacgggagctg
caaggcgccgatggtgacaagctggacctgctagtccgcgcaagggcgctgctcgcagcc
tga
DBGET
integrated database retrieval system
