Porphyrobacter sp. YT40: E2E27_06645
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Entry
E2E27_06645 CDS
T06153
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pot
Porphyrobacter sp. YT40
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
CSD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QDH34041
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Position
1414890..1419101
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AA seq
1403 aa
AA seq
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MQVRHFLLSTAAVLVPAMLVPSQLAAQTTLEAPPIRSAVDEFGVDLTTGKVIIPSASVSV
GGADGIAFSRTRVSNGWRHNYIITAIIKQGQATASVNIGGSRMTFNLVSGVYRSAQGTGE
TIVPNFTTGTHVFTARDGTQIIFKRSYVANGASYYGLVDAVAETIVRPDGHRTTLHYHND
SYQYSIPALSLVIDIPMLRLEGVSTNNSYLIEFRYATDTLNSTTVNDWERVLKVTAANGG
VDDCDFTSAVDCPFSVDWPSLGFVPATDSAGQPIEIVIDNLNRSSAYRTDASGRLTGIKG
PSDSSYGVVYNYDANSRVSSVVREGTYTRNYTWTVLGNGNLQAVATDSLGRTRTTVANPS
LGVLVSDRNALNQTTSYEYDANGRLSAVQRPEGNRTQYTRDARGNVTTVTQKAKPGTFLA
DIISTATFPANCTNPVTCNKPTATTRAGAETTNYTYDPTHGGVTLVEAPPDQSGARAETR
IAYVARVAKIMTPSNVLVDQPTSIVVPSNIRTCRTQAQCTGTANEGNADIAYDANVSPNL
NPTTITTRAGDSSLAASTNYTYSTLGKVATIDGPLPGSDDTTVYRYDVAGQITGVISPDP
DGAGSLPRLATRTTYNNNGQVTLVENGQMPGTSPADWNSFSARTRLANTYDNFDRLASSS
QISTDGATRYSITQYSYDAAGRLDCTAVRMNLTSATASLPSDVCVKMTPAADGEDRITRR
YYDTADRATQVWSAVDTGLAQQTAEMAYNANGTVAWVEDANNNRTIYVYDGHDRTRRINY
PYQDTPGVSNPGDYEEITYDTANNVSQFRTRRGETISLAYDNRRLLTQKTIPERAGLDPL
HTRDVTYKYDLYGSLTEAAYDSSNRIVVSYDAFGRPVGSTQIMDGVSRPISYLYDVAGRQ
TRITHPDSAWWAYEYDTVGRLVRIRDDDGIELVTNVYDTWGRLERMNRDSSAPDSLMFYD
NANRLDRIFVDHPSSSYDVNRTFSYNQTNQAKSEATDNQLYVWNAQPAGSLDTPYVPDGL
NQYDSVNGVTYVHDASGNLTSDGATTYTYDVENRLVSASGAKTAGLRYDPLGRLYQITNE
SGGITRLLYDADALVGEFNPSGTMLNRYVHGLGAGDDPMIRYAGSNAGRSAAEYLYADRL
GSIVASFDWGGSVKAINTYDEFGRPGIPGGTANTGRFRYTGQIWILELGQYHYKARAYSP
TLGRFMQTDPIRYGDGLNMYAYVGNDPINRFDPTGLDFCDMKEGKSKEQEDCERNGGVWV
AEGAEINVTIDTYTLSVPYGGLSSSFGGVSLRRPGVFIGRDEKTKKPIRVEIVERDRLNN
SSQRFQPIVTVDLRSTDQKVCDAATGVQRVGNGMMAAGVVVFWGGMGLTPLFPDGEIAGP
VIAGAGGVVYLGSEVVKMLADCE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcaggcattttctactttccactgccgcggttctggtgcccgcaatgctggtg
ccctcgcagctggctgctcagacaacgcttgaagcgccgccgatccgcagcgcggttgat
gagttcggtgtcgacctcacaaccggtaaagtcattattccttcggccagcgtgtcggtg
gggggcgctgatgggatcgccttttcacgcacgcgggtcagcaatggctggcgccacaat
tacatcatcaccgccatcatcaagcagggtcaggcgaccgcttcggtcaacatcggcggc
tcgcggatgacattcaatctggtcagcggggtctatcgttctgcgcagggcaccggcgaa
acgattgttccgaacttcacaaccggtacgcacgtgttcactgcgcgggacggaacgcag
atcattttcaagcgctcctatgttgcgaatggcgccagctactatggactggtcgatgct
gtggccgagaccattgtcagaccagatggtcaccggactaccctgcattaccacaacgat
agctatcaatactcgatcccggctctttcgctcgtgatagatatccccatgctccgcttg
gaaggtgtctcaaccaataacagctatttgatcgaatttcgctacgccactgacacactg
aactccacgaccgtcaatgactgggagcgggtgctcaaggtcacggctgccaatgggggc
gttgatgattgtgactttacaagtgctgtcgattgcccgttttcggtcgactggccatcg
ctcggttttgtgccagccactgacagcgcaggtcaaccgattgagatcgtgatcgacaac
ctcaacagatcaagtgcctatcgtactgatgcgtctggtcgcctcacaggcatcaagggg
cccagcgacagttcatatggtgtcgtctacaattatgacgctaacagccgcgtctccagc
gttgtcagggaaggaacctacacccgcaactacacctggacggtcctcggtaatggcaac
ttgcaggctgtcgcaaccgactccttgggacgtactcggacgacggtcgccaacccatcg
ctgggggtacttgtctctgatcgcaacgcgctcaatcagaccaccagctacgagtacgac
gccaatggcaggctaagcgccgtgcagcgccccgaaggcaatcggacccagtatacccgt
gatgctcgcgggaacgtgaccacggtcacgcagaaagccaagccgggcacgttccttgcg
gacatcatctcgacggcgacattccccgcgaactgcacgaacccggtgacctgcaacaag
ccaacggcgacaaccagagccggcgctgagactaccaattacacctacgatcctacccat
ggcggggtcaccctcgttgaagcgccccccgaccagtctggcgctcgcgccgagacgcgg
attgcttatgtggcacgcgtagcgaagatcatgaccccatccaacgtcctcgtggatcag
ccgacatcgattgtcgtgccgtcaaacatcaggacctgtcggacgcaggcgcaatgcacc
gggactgcgaacgagggcaatgctgacattgcctatgacgcgaacgtctccccgaacctc
aatcccaccaccatcaccacccgcgccggcgacagcagtctcgccgcttcgacgaactac
acatattccacgctgggcaaggtggcgacgatcgatgggccgctgcctggcagcgatgac
acgaccgtctaccgctatgatgtcgcaggccagattacgggggtgatctcccccgatccc
gacggcgctggttctttgccgcgcctcgccacgcgcaccacctacaacaacaatggccaa
gtgacgctggtcgagaacggtcagatgccgggcaccagcccggccgactggaacagcttt
tctgcccgcaccagattggcgaacacctacgacaatttcgaccggctcgcttccagcagc
cagatctcgaccgatggcgcaacgcggtactcgatcacgcagtacagctacgatgcagcc
gggcggctcgactgcaccgccgtccggatgaacctgacgagcgctactgcgtctctgccg
tcagatgtctgcgtgaagatgaccccggcggcggatggcgaggaccggatcacgcgtcgc
tactacgacaccgcagacagggccacgcaggtctggtcggctgtcgataccgggctcgcc
cagcaaaccgccgagatggcctacaacgccaacgggacggtcgcgtgggttgaggatgcc
aacaataatcgcacgatctatgtatatgacgggcacgatcggacgcggcggatcaactat
ccctatcaagataccccgggggtctccaacccaggcgattacgaggagatcacctacgat
acggcaaacaacgtctcgcagttccgcacgcggcgcggtgagacgatctcgctagcctac
gataaccgccgcttgctgacccagaaaacgattcccgaacgtgcggggcttgacccgctg
cacacccgcgacgtcacttacaagtacgacctctatggatcgctgaccgaagccgcatac
gacagctcgaaccggatcgtcgtgagctacgatgcgtttgggcgccccgtcggcagcacg
cagattatggacggcgtatcgcggccgatttcctacctctacgatgttgctggacggcag
acccggatcacgcatcccgacagcgcatggtgggcgtacgaatacgatactgtcggtcgc
ctcgtacggatccgcgacgatgacgggatcgagcttgtcaccaacgtctatgacacctgg
gggcggctcgagcggatgaaccgcgacagcagcgcgcccgatagcctgatgttctacgac
aatgcgaaccggctagaccgtatcttcgttgatcacccgagcagcagctacgatgtcaat
cggacctttagctacaaccagaccaatcaggcgaagagcgaggcgaccgataaccagctt
tatgtctggaatgcccagccagcgggcagtctcgacaccccctatgtacccgatggactg
aaccagtacgacagtgtcaacggcgtgacctatgttcacgatgccagcggcaacctgacc
tctgatggcgccaccacctacacctatgatgtcgaaaataggctcgtcagcgcttccggc
gccaagacggcggggctacgctatgatcctctcggccggctctaccagatcaccaatgag
tctggcggcatcacccgcttgctgtatgatgccgatgcgttggttggcgagttcaacccc
agcggcacgatgctcaatcgctacgtgcacgggcttggcgcgggagacgatccgatgatc
cgctatgcgggatcaaatgctggacgcagcgccgctgagtatctctatgcggatcggctc
ggatcaatcgtggccagtttcgattggggcggctcggtcaaagcgatcaatacctacgat
gaattcggtcggcccggaatcccaggcggcacagcgaacaccgggcggttccgctacacc
gggcagatctggatccttgagctggggcagtatcattacaaggcccgtgcctactcgccc
actctcggccggttcatgcagaccgacccgatcaggtatggtgacggacttaatatgtat
gcctatgtcgggaatgacccaataaaccggttcgatccgactggcttggatttctgcgac
atgaaggagggtaaatcaaaagagcaagaggattgcgagagaaacggaggagtttgggtt
gctgaaggcgctgagataaatgtcacaatagatacatatacactgtcagttccttatgga
ggattatcgagttcgtttggtggcgtaagtctaagaagaccaggagttttcattggccgg
gacgaaaaaaccaaaaagcccattcgagtagaaattgttgaaagggatcggttgaataat
tcgagtcaacgattccaacccattgttacagtcgatcttcgatcgactgatcagaaggtt
tgcgatgcagctacgggtgtgcaaagagtaggaaacgggatgatggctgcaggggtagtt
gtcttctgggggggcatgggactcactccattgtttccagatggagaaattgccggacca
gtgattgctggcgccggaggagttgtatacttgggcagcgaagtcgtaaaaatgttagca
gattgcgaatga
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