Porphyrobacter sp. YT40: E2E27_07955
Help
Entry
E2E27_07955 CDS
T06153
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pot03016
]
E2E27_07955 (truB)
Enzymes [BR:
pot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E2E27_07955 (truB)
Transfer RNA biogenesis [BR:
pot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E2E27_07955 (truB)
Prokaryotic type
E2E27_07955 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QDH34259
LinkDB
All DBs
Position
1708157..1709131
Genome browser
AA seq
324 aa
AA seq
DB search
MSAPLSGWLILDKPRGMGSTQGVSAVKRVLRQNGYAKTKVGHGGTLDPLAEGVLPIALGE
ATKLAGRMLDSDKIYAFTVKFGGETDTLDTEGPVIATSDVRPTRAEVEAVLPRFTGPIEQ
VPPAYSALKLDGQRAYDRARAGEAVELKARAVTIHTLSVRAELVEVPHFSSEVQDGPSTS
SGRSGLDAITLVAHVSKGTYIRSLARDIAHALGTCGHVTYLRRIKAGPFREEQAISLDFM
EETAKGQGLEHLLLPLEAGLDDIPALHLDQTSAQAVRQGRVLSDMPQSSGLYLAKLGAVP
VALMEITEGTAKVVRGFNLPDVAE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgccgctttccggctggctgatcctcgacaagcctcggggcatgggcagcacg
cagggcgtgagcgcggtcaagcgggtgctgcgccagaacggctatgccaagaccaaggtc
ggccacggcggcacgctcgacccgctggcggaaggcgtgctgccgatcgcgctgggcgag
gcgaccaagctcgccggacggatgctcgacagcgacaagatctatgccttcaccgtcaag
tttgggggggaaaccgacacgctcgataccgaagggcccgtgatcgccaccagcgatgtg
cgcccgacgcgggccgaggtggaggcggtgctgccccgttttaccgggccaatcgagcag
gtgccgccggcttactccgcgctgaaattggacggccagcgcgcctatgaccgcgcacgg
gcgggggaggcggtggagctgaaggcgcgggcggtgacgattcacaccctctccgttcgg
gctgagcttgtcgaagtcccgcacttttcttcggaagtgcaggacggcccttcgacaagc
tcagggcgatcgggtttggacgccatcaccctcgtcgcccacgtctccaagggcacctac
atccgctccctcgcgcgcgacatcgctcatgcgcttggcacctgcgggcacgtgacctat
ctcaggcgcatcaaggccgggccgttccgcgaggaacaggcgatttcgctggacttcatg
gaggaaaccgctaaggggcagggccttgaacaccttctcctgccgctggaggcagggctg
gacgacatcccggcccttcacctcgatcagacaagcgcgcaggcggtccggcagggccgg
gtgctgtctgacatgccccaatcatccgggctctatctggcgaagctgggcgctgtcccg
gtcgcattgatggaaatcacggaggggacggccaaggtcgtccggggtttcaaccttccc
gatgtcgctgagtaa
DBGET
integrated database retrieval system
