Porphyrobacter sp. YT40: E2E27_09670
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Entry
E2E27_09670 CDS
T06153
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00020
Citrate cycle (TCA cycle)
pot00640
Propanoate metabolism
pot00660
C5-Branched dibasic acid metabolism
pot00720
Other carbon fixation pathways
pot01100
Metabolic pathways
pot01110
Biosynthesis of secondary metabolites
pot01120
Microbial metabolism in diverse environments
pot01200
Carbon metabolism
Module
pot_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pot_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E2E27_09670 (sucD)
00640 Propanoate metabolism
E2E27_09670 (sucD)
00660 C5-Branched dibasic acid metabolism
E2E27_09670 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
E2E27_09670 (sucD)
Enzymes [BR:
pot01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
E2E27_09670 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QDH34570
LinkDB
All DBs
Position
complement(2069122..2070012)
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AA seq
296 aa
AA seq
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MSILVNKDTKVITQGMTGNTGTFHTQAALDYGTQMVAGVTPGKGGTTHIGLPQFDTVREA
KAATGATASCIYVPPPFAADAICEAIDAEIELIICITEGIPVLDMVRAKRALAGSKSRLI
GPNCPGVLTPNECKIGIMPANIFKKGSVGIVSRSGTLTYEAVHQTTMAGLGQTTAVGIGG
DPVNGTNFIDVLDLFLDDPETESIIMIGEIGGSAEEEAAAFIKAERAKGRSKPMVGFIAG
RTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEDAGIRVSPSPSLLGETLAAMLKENA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcctcgtaaacaaagacaccaaggtcatcacccaggggatgaccggcaacacc
ggcaccttccacacccaggccgcgctcgattacgggacgcagatggtcgcgggcgtgacg
ccgggcaagggcggcaccacccatatcggcctgccgcagttcgacaccgtgcgcgaagcc
aaggccgcgaccggcgcgaccgcttcgtgcatctacgtcccgccgccgttcgccgccgac
gcgatctgcgaggcgatcgatgccgagatcgagctgatcatctgcatcaccgaaggcatc
ccggtgctcgacatggtccgcgccaagcgcgcgctcgcgggctccaagtcgcgcctgatc
ggccccaactgccctggcgtgctgacccccaacgagtgcaaaatcggcatcatgccggcc
aacatcttcaagaagggctcggtcggcatcgtctcgcgctcgggcacgctcacctatgaa
gccgtgcaccagaccaccatggcgggcctcggccagaccaccgcggtcggcatcggcggc
gacccggtcaacggcaccaacttcatcgacgtgctcgacctgttcctcgacgatccggaa
accgaaagcatcatcatgatcggcgaaatcggcggttcggcggaagaagaagccgccgcc
ttcatcaaggccgaacgcgccaagggccgttccaagccgatggtcggcttcatcgccggg
cgcaccgcccctccgggccgccgcatgggccacgcgggcgccatcgtcagcggcggtcag
ggcggcgccgaagacaagatcgcggcgatggaagatgcgggtatccgcgtctcgccctcg
ccctcgctgctcggcgagacgctggcggcgatgctgaaagagaacgcctga
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