Porphyrobacter sp. YT40: E2E27_09820
Help
Entry
E2E27_09820 CDS
T06153
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
E2E27_09820
Enzymes [BR:
pot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
E2E27_09820
Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
E2E27_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_2
Motif
Other DBs
NCBI-ProteinID:
QDH36160
LinkDB
All DBs
Position
complement(2097243..2099123)
Genome browser
AA seq
626 aa
AA seq
DB search
MPAAAQDWGSGSDLVARQPGAVDAAIARWEVLQASRTHSFADYAGFVMAWPGFPRADILR
LRAEAALENEAPPQADVIAFFDANPPLTNPARARYALALAAVQRPEALTEARKAWRGGEM
GDAVELYISQIWGSQFTAEDHALRADALLWQGKADAASRHVINLAEPDRPLALARLSLVR
GARPEAAGIAVPAGAEADPGYVFNLVKFLRSSGQNYEAARVFTNRPAFNRPALDPEAFVG
QLLGLAEDVGPSDAARIAARSEDLFAPGTDLSATSFTLRDRLTDLMWLGGTKALWNMGDG
ASAAPLFARYGDAAKTPLTKAKGYYWAGRAARTAGNEGAARTYFEMAAQWPEYYYSQLAL
SALGRPMPSFAGLPQPAMDASVRAEFEARPVVKAIRALARTRRDWRTERRFFEALGDEAD
TPTEMLMAAMLAREVGLDEMAVVLGMKAGENGLNGLERIGFPTVPTPSFVNDWTMVHAIA
RQESEFDRTRRSHAGAIGLMQLMPGTAREQAGKSGGQYLASNLTEAPQYNIQLGDAYFAR
MMSYYGGAYPLAVGAYNAGPGRVNQWLRLNGDPRKGEIDWVTWVEKIPANFETRYYIMRV
IGNAVTYSHMYPQEAGLPRPVDSFLR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagccgcgcaggattggggatcgggcagcgatctggtcgcccgccagcccggc
gcggtggatgccgcgattgcccgctgggaagtgcttcaggcgagccgcacccacagcttc
gccgactatgccggtttcgtgatggcctggccgggctttccccgcgccgacattctgcgc
ctgagggccgaagcagcgctggaaaacgaagcgcccccgcaagcggacgtaattgccttc
ttcgacgccaaccccccgctcaccaacccggcccgcgcgcgttatgctctggcgctcgcc
gccgtgcagcggcccgaggcgctgaccgaagcacgcaaggcgtggcgcggcggcgaaatg
ggcgatgcggtggagctctatatttcccagatctggggttcgcagttcaccgcggaagat
catgcgctgcgcgccgatgcgctgctgtggcagggcaaggccgatgccgcctcgcgccat
gtgatcaaccttgccgaacccgaccgcccgctggcactggcgcgcctgtcgctggtgcgc
ggcgcccgccccgaagcggcggggatcgcggtgcccgccggggcggaggccgatcccggc
tatgtcttcaacctcgtcaagtttctgcggtcgagcggccagaattatgaagccgcgcgg
gtcttcaccaatcgcccggccttcaaccgcccggcgctcgatcccgaggcattcgtcggc
cagttgctgggccttgccgaagatgtcgggccgagcgacgcggcccgcattgccgcccga
agcgaggatctcttcgcccccggcaccgatctgtcggcgaccagcttcacgctgcgcgac
cggctgaccgatctgatgtggctggggggcaccaaggcgctgtggaatatgggcgacggc
gccagcgccgcgccgctcttcgcgcgctacggtgatgcggccaagaccccactgaccaag
gccaagggctattactgggccgggcgcgccgcacgcactgcgggcaacgagggcgcggcg
cgcacctatttcgaaatggcggcgcagtggcccgaatattactactcgcagctcgcccta
tcggcgctcggccgcccgatgccgagctttgccggactgccgcagcccgcgatggacgcc
agcgtgcgcgccgagttcgaagcgcgccctgtcgtgaaagcgatccgcgcgctcgcccgc
acgcgccgcgactggcgcaccgaacgccgtttcttcgaagcgctgggcgacgaggccgac
acgccgaccgaaatgctgatggcagcgatgctcgcacgcgaagtcgggctcgacgaaatg
gctgtggtgctgggcatgaaggcgggcgagaacggcctcaatggccttgaacgcatcggt
tttcccaccgtgccgacgccctccttcgtcaatgactggacgatggtccacgccatcgcg
cggcaggaaagcgaattcgaccgcacccggcgcagccatgcgggcgcgatcgggctgatg
cagctgatgccgggcacggcgcgcgaacaggcgggcaaatcgggggggcaatacctcgcc
agcaacctgaccgaggcgccgcaatacaatattcaactgggtgatgcctatttcgcgcgg
atgatgagctactacggcggcgcctatccgctggccgtgggcgcctacaatgccgggccg
gggcgcgtgaaccagtggctgcggctcaacggcgacccgcgcaagggcgagatcgactgg
gtgacatgggtcgagaagatccccgccaatttcgagacgcgctattacatcatgcgcgtg
atcggcaatgcggtgacctattcgcacatgtatccgcaagaggccggcctgccgcgcccg
gtcgacagcttcttgcgctga
DBGET
integrated database retrieval system
