Porphyrobacter sp. YT40: E2E27_10470
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Entry
E2E27_10470 CDS
T06153
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00020
Citrate cycle (TCA cycle)
pot00190
Oxidative phosphorylation
pot00650
Butanoate metabolism
pot00720
Other carbon fixation pathways
pot01100
Metabolic pathways
pot01110
Biosynthesis of secondary metabolites
pot01120
Microbial metabolism in diverse environments
pot01200
Carbon metabolism
Module
pot_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pot_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pot_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
E2E27_10470
00650 Butanoate metabolism
E2E27_10470
09102 Energy metabolism
00190 Oxidative phosphorylation
E2E27_10470
00720 Other carbon fixation pathways
E2E27_10470
Enzymes [BR:
pot01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
E2E27_10470
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_oxidored
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
QDH34706
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Position
2235540..2237408
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AA seq
622 aa
AA seq
DB search
MATAAAPGTANDVGGAHLKGAYKIIDHTYDVVVVGAGGSGLRATMGAAESGLRTANISKV
FPTRSHTVAAQGGIAASLGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYLAREAPAAVYEL
EHAGVPFSRNADGTIYQRPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSLKYDA
DFFIEYFALDLIMDERDGVKQCVGVMAMCLDDGTIHRFRAQSVVLATGGYGRCYYTATSA
HTCTGDGGGMVLRAGLPLQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMER
YAPSAKDLASRDVVSRSMALEMREGRGVGPEGDHIYLHLDHIDPNVLAQRLPGITESGKI
FAGVDLTREPLPVTPTVHYNMGGIPCNYHGQVVTLGPDGNPDTVIPGLYAVGEAACVSVH
GANRLGSNSLIDLVVFGRATGHHLRDNLTPNAKQPELPADSADFALTRLDHFRYAQGGSP
TAQIRAEMQKAMQKHCAVFRDQKLMDEGVAKLAEQNKRMEDIHVTDKSLIWNSDLIETLE
LDNLMAQANVTMASAANRKESRGAHAHEDFPDRNDAEWMKHTIAWFDGWGGRGSNSRIDY
RPVHEYTLTDDIKYIEPKARVY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgcagcagcacccggcaccgccaatgatgtcggcggggcgcatctgaagggc
gcttacaagatcatcgaccatacctatgacgtggtggtggtaggcgcgggcggcagcggc
ctgcgcgccacgatgggcgccgcggaaagcggtctgcgcaccgccaacatctcgaaggtg
ttccccacacgaagccacaccgtcgcggcgcagggcgggatcgccgcctcgctcggcaac
aactcgcccgatcactggacctggcacatgtacgacaccgtcaaggggtcggactggctg
ggcgatcaggacgcgatcgaatatctcgcgcgcgaggctccggctgcggtctatgagctg
gaacacgctggtgtgcccttcagccgcaatgccgatggcacgatctatcagcgccccttc
ggcggccacatgcagaacatgggcgccggcccgccggtgcagcgcacctgcgccgccgcc
gaccgcaccggccacgcgatgctccacgcgctctaccagcagtcgctgaagtacgacgcg
gacttcttcatcgaatatttcgcgctcgacctcatcatggacgagcgggacggggtgaag
cagtgcgtcggcgtgatggcgatgtgccttgacgacggcacgatccaccgcttccgcgcg
cagtcggtcgtgttggcgaccggcggctacgggcgctgctactacaccgccaccagcgcc
cacacctgcaccggcgacggcggcgggatggtgctgcgcgcgggcttgccgctgcaggac
atggagttcgtgcagttccacccgaccggcatctacggcgcgggcgtgctgattaccgaa
ggcgcgcgcggggaggggggctacctcaccaactccgaaggcgagcgcttcatggagcgt
tatgccccgtccgcgaaggacttggcctcgcgtgacgtagtttcgcgctcgatggcgctc
gaaatgcgtgaagggcgcggcgtggggccggagggggatcacatctatctccacctcgac
cacatcgaccccaatgtgctggcgcagcgcctgccgggcatcaccgaaagcggcaagatt
ttcgccggtgtcgacctgacccgcgagccgctgcccgtcactccgacggtgcactacaac
atgggcggcatcccgtgtaattatcacgggcaggtcgtgacgctggggccggatggcaat
ccggataccgtcatccccggcctctacgccgtgggcgaggcggcctgcgtttcggtgcac
ggggcgaaccgcctcggctcgaactcgctgatcgatctcgtggtcttcggccgcgcgacc
ggccaccacctgcgcgacaacctgacgcccaatgccaagcagccggaactgccggcggat
agcgcggacttcgccctgacccggctcgaccacttccgctatgcgcagggcggctcgccc
accgcgcagatccgtgccgagatgcagaaggcgatgcagaagcactgcgccgtgttccgc
gaccagaagctgatggacgagggcgtcgccaagctcgccgagcagaacaagcggatggag
gacatccacgtcaccgacaagtcgctgatctggaactctgaccttatcgagacgctggag
ctcgacaacctgatggcgcaggccaatgtgaccatggcgagcgcggcaaaccgcaaggaa
agccgcggcgctcacgcacacgaggacttccccgatcgcaacgatgccgagtggatgaag
cacaccatcgcctggttcgacggctggggcggtcgcggctcgaacagccggatcgattac
cgcccggtgcacgagtacactttgactgacgacatcaagtatatcgagcccaaggcgcgc
gtgtattga
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