Porphyrobacter sp. YT40: E2E27_10540
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Entry
E2E27_10540 CDS
T06153
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E2E27_10540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pot03019
]
E2E27_10540
Messenger RNA biogenesis [BR:
pot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
E2E27_10540
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Ortholog
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GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QDH34719
LinkDB
All DBs
Position
complement(2250345..2250824)
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AA seq
159 aa
AA seq
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MSFDHLPYRPCAGFMLVNREGLVFVGERIDPSAHGYWQMPQGGIDKGEDVRAAALRELEE
EIGVGPDLVEVIAPASRPIRYDLPPELVGKVWKGKYRGQEQHWFLGRFLGEDADIDLEAH
DPPEFHAWRWIAPEDLPALIIPFKRAVYEEVLAEFRDLI
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgaccacctgccctatcgcccctgcgcgggcttcatgctggtgaaccgcgag
gggctcgtcttcgtcggcgagcggatcgatccttcggcgcatggctattggcagatgccg
cagggcgggatcgacaagggtgaggacgtgcgcgccgccgcgctgcgcgagcttgaggag
gagatcggcgtcggccccgatctggtcgaagtgatcgcccccgcctcacgcccgatccgc
tacgatcttccccctgaactggtcggcaaggtatggaagggcaagtatcgcgggcaggaa
cagcactggttcctcgggcgctttctgggcgaggatgccgatatcgacctcgaagcgcac
gatccgcccgaattccacgcctggcgctggatcgcgccggaggatctgcccgcgctgatc
atcccgttcaagcgggcggtttacgaggaagtgctggcggagttccgcgacctgatctga
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