Porphyrobacter sp. YT40: E2E27_10555
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Entry
E2E27_10555 CDS
T06153
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pot03400
]
E2E27_10555
Enzymes [BR:
pot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E2E27_10555
DNA repair and recombination proteins [BR:
pot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E2E27_10555
Prokaryotic type
E2E27_10555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QDH34722
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All DBs
Position
2252984..2254375
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AA seq
463 aa
AA seq
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MSSPQIVWLRRDLRLADNPALYHAAKAGPVVCVFVLDDDAPKHHAYGGASRWWLHHSLES
LSNSLAQRHAKLILRRGDAVEELAKVAKQTGASVIHANRHYEPWWRKAQKKLAESHDLQL
YDGNYLMPPGSVTTGSGDPYKIYTPFLRAMRSAFPPRDELPVPETLSSPENWPASDDLDD
WNLLPTKPDWAGGMRDFWQVGEDAARDRLEAWEADVDDYDDKRNFPSVDKVSRLSPHLHF
GEISPIQIWHHFKHKRSDGWRTFEGELIWRDYAQNAICQFPDYATANYREDFDKFPWRDP
AKDEKAASDLKAWQQGRTGYPIVDAGMRQLWQTGWMHNRVRMITASFLIKHLLIDWREGE
KWFWDCLVDADYASNATNWQWTAGTGVDSNMFSRIMAPLTQSEKFDAARYIRTYVPELKG
LSDAAVHDPEEAGCRPSGYPRKIIAHKAARERALAALKDMKGG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgagttccccccaaatcgtatggctccgccgcgacctgcgcctcgccgataaccctgcg
ctgtatcacgccgccaaggccgggccggtggtgtgtgtcttcgtgctcgatgacgacgcg
cccaagcaccacgcctatggcggcgcctcgcgctggtggctccatcattcgctcgaaagc
ctgtcgaacagcctcgcccagcggcacgcgaagctgatcctgcggcgcggggatgcggtg
gaggagttggcgaaggtcgccaagcagaccggcgcgagcgtgatccacgccaatcgccat
tacgagccgtggtggcgcaaggcgcagaagaagcttgccgaaagtcacgacctgcaactc
tacgacggcaattacctgatgccgcccggcagcgtcaccacgggcagcggcgatccctac
aagatctacacgcccttcttacgcgcgatgcgcagcgcctttccgccgcgcgacgaattg
cctgtgcccgaaaccttgtcctcgccggaaaactggcccgccagcgacgacctggatgat
tggaacctgctccccaccaagcccgactgggcgggggggatgcgcgacttctggcaggtg
ggcgaggatgcggcgcgcgaccggctcgaagcgtgggaagccgatgtcgacgattacgac
gacaagcgcaatttcccctcggtcgacaaggtctcgcgcctctcgccgcatctgcacttc
ggcgaaatttcgccgatccagatctggcaccacttcaagcacaagcgctcggacggctgg
cgcaccttcgagggcgagctgatctggcgcgactatgcccagaacgcgatctgccagttc
cccgactatgccaccgcgaattaccgcgaggacttcgacaagttcccgtggcgcgatccc
gcgaaggacgagaaagccgccagcgatctgaaagcctggcaacagggccgcaccggctac
ccgatcgtcgatgccgggatgcggcagctgtggcagaccggctggatgcacaaccgcgtg
cggatgatcaccgcgagcttcctcatcaagcatctgctgatcgactggcgcgagggcgag
aagtggttctgggattgcctcgtcgatgccgactacgcctccaacgccaccaactggcag
tggacggcggggacaggagtggacagcaacatgttcagccggatcatggcgccgctgacc
cagtcggagaaattcgatgccgcgcgctatatccgcacctatgtgcccgagctcaaaggg
ctgtccgatgccgcggtgcacgatcccgaggaggccgggtgccgcccctccggctatccg
cgcaagatcatcgcccacaaggccgcgcgcgagcgggcgctggcggcactcaaggacatg
aagggcggctga
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