Porphyrobacter sp. YT40: E2E27_11340
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Entry
E2E27_11340 CDS
T06153
Name
(GenBank) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
E2E27_11340
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pot01007
]
E2E27_11340
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pot03016
]
E2E27_11340
Enzymes [BR:
pot01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
E2E27_11340
Amino acid related enzymes [BR:
pot01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
E2E27_11340
Transfer RNA biogenesis [BR:
pot03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
E2E27_11340
Prokaryotic type
E2E27_11340
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
AP_endonuc_2
ProRS-C_1
Motif
Other DBs
NCBI-ProteinID:
QDH34864
LinkDB
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Position
complement(2421509..2423053)
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AA seq
514 aa
AA seq
DB search
MSQIRHALTVKREDDFAKWYQEVISAADLAEESGVRGCMVIKPWGYGIWERIQRLMDDRI
KAAGVQNCYFPLFIPLANFTREAEHVEGFAKEMAVVTHHRLIADGKGGLIPDPEAKLEEP
LVVRPTSETIIGDAMARWVQSWRDLPLLTNQWANVVRWEMRTRMFLRTSEFLWQEGHTAH
ENREQALEETHRALEMYRACAEDDLALPVIAGEKPENERFPGAVETWSIEAMMQDGKALQ
AGTSHYLGTNFAHAAGIQFQDREGGQQYCHTTSWGVSTRLIGGVIMTHGDDDGLRVPPAI
APHQIVIIPMLREAPEDAELIAYCAELRVALAGQTALGERLRVLLDTKPGKSAAKRWDWV
RKGAPIIIEVGPRDMAEGKIALLRRDKLWNAENGKPAFTYPLQSDFVALAGGLVEEIQKG
LYEEARARRDANITRGVADWQAVVDHFEKGGKYPGWVEVEWAKPTGAALDAVVEKLKSVK
LTIRNVPRDGDAASGTCIFTGELAAERILVARAY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcagatccgccacgcgctcaccgtcaagcgcgaagacgattttgccaagtggtat
caggaggtgatctccgccgccgacctcgccgaggaatcgggcgtgcgcggctgcatggtg
atcaagccgtggggctacggcatctgggagcgcattcagcgcctgatggacgaccggatc
aaggcggcgggcgtgcagaactgctacttcccgctgttcatcccgctcgccaatttcacc
cgcgaggccgagcatgtcgaaggcttcgccaaggagatggcggtcgtcactcatcaccgc
ctgattgccgatggcaagggcgggctgatccctgatcccgaagccaagctcgaagagccg
ctggtggtgcgcccgacctccgagacgatcatcggcgatgcgatggcgcgctgggtgcaa
tcgtggcgcgatttgccgctgctcaccaaccagtgggccaacgtcgtgcgctgggaaatg
cgcacgcggatgttcctgcgcaccagcgagttcctctggcaggaaggccacaccgcgcac
gagaaccgcgaacaggcgctcgaggaaacgcaccgcgcgctcgaaatgtatcgcgcctgt
gccgaggatgatctcgcgctccccgtgatcgcgggcgagaagcccgagaacgagcgtttc
cccggcgcggtcgagacctggtcgatcgaggcgatgatgcaggacggcaaggcgcttcag
gcgggcacctcgcactatctcggcaccaacttcgctcatgcggccggcatccagtttcag
gaccgcgagggcggccagcaatattgccacaccaccagctggggcgtgtcgacgcggctg
atcggcggggtgattatgacccacggcgatgacgacgggctgcgcgtcccgcccgcgatc
gcgccgcaccagatcgtcatcatcccgatgctgcgcgaagcgcccgaggatgccgagctg
attgcctattgcgccgagctgcgcgtggcgctggccgggcagaccgcgctgggcgagcgg
ctgcgcgtgctgctcgacaccaagcccggcaagtccgctgccaagcgctgggactgggtg
aggaagggcgcgccgatcatcatcgaggtcggcccgcgcgacatggccgaaggcaagatc
gccctcctgcgccgcgacaagctgtggaatgccgagaatggcaagcccgccttcacctat
ccgctccagagcgatttcgtcgcgctggccggcggtttggtcgaggaaatccagaagggt
ctctacgaggaggcccgcgccaggcgcgatgccaacatcacgcgcggtgtcgccgattgg
caggcggtggtcgatcacttcgagaagggcgggaagtatcccggctgggtcgaagtcgag
tgggccaagcccaccggcgcggcgctcgatgcggtggtcgagaagctgaagtcggtgaag
ctcaccatccgcaacgtgccgcgcgacggcgatgcggcgagcggcacctgcatcttcacg
ggagagctggcggccgaacgcattctggtggcgcgggcctattga
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