Porphyrobacter sp. YT40: E2E27_12110
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Entry
E2E27_12110 CDS
T06153
Name
(GenBank) conjugative relaxase
Organism
pot
Porphyrobacter sp. YT40
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
Viral_helicase1
TraI_2B
AAA_22
ABC_tran
AAA_16
NTPase_1
NACHT
SLFN-g3_helicase
PIF1
TraI_hel_assoc_N
NPHP3_N
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QDH35003
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All DBs
Position
complement(2591846..2594770)
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AA seq
974 aa
AA seq
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MLSVANVRTARGAANYFAADNYYTRADAERSGQWLGKGAEKLGLLGSIEASQFEAVLKGL
LPDGSRVGTDNRGHRAGTDLTFSMPKSWSILALVGGDRRILDAYGAAVRETLAWAEKNLA
ETRMEVKGKERVAQTGNLVIGLFQHDTNRNQEPNAHVHAVVANVTQGPDGKWRALRNDKL
WEHNTLLNAMTMARFRLGVEKLGYQVGEYGKHGNFEAVGVPKAVRDAFSSRRAEILDKLS
SMESKGLAARNAANLMTRANKGPVEDRGALLNRWREEAARHDFDPAIVIAQANARTVNDI
GSVSGIGNSVRVIAQRGRLFAAAIAERLGLREGDPLVPLNMGNRTPEQIAALHAVASAVR
HLGEREAAFSRTEIYRAALGFALPTSLADIERRVDQLLRQGHLQRGKGADRDLVTTRDAI
GLEQRIIAAVESGRGLGAAIVSAEVAGERLQALSQLKYGLSLNPGQEGAGRLLLASHNRI
VAIQGVAGAGKSTVLKPVADILREEGKAVLGLAVQNTLVQMLERETGIPSMTVARFLRQH
QGLLEGADRARLAEARASMRGTIVLLDEASMVGNADKEKLVRLANLLQLDRFASIGDRKQ
LGAVDAGKPFDVMQKAGVETAVMNINLRARGKALRDAQHAAQGGHIDGALRHLGSHVVEA
GNQAAVEAAAAWLSLSPGERETTAIYASGRALRGEVNEAVQTGLKANGELGPGSLKLAVL
SRVNLTREELRYARSYAAGMVLEVGRRQRGQGLNKGRYEVVDTDPARERVTLRNERGRHF
EFRPGQLRPQGEQEALRLFEVRPLEIHDGDRIRWTATDHKRGLLNADQARIVAIDGKGVT
VKTSLGAEHRLAQGEPMLERLDLAYALNAHMAQGLTSDRGIAVMDSRERNLANQQTFLVT
VTRLRDGLTLFVDNPGKLEAAVERNSGMKRSALETVNLLRDAAASGLANGRTPEPMREPP
ELDRSITKPFEIGI
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgctctctgtagccaatgtccgcaccgcccgcggcgctgccaactattttgcagccgac
aattactacacccgcgccgatgccgaacgctccggccaatggctggggaagggcgccgaa
aagctcgggctgcttgggtccatcgaagcctcgcagttcgaggctgtgctcaagggattg
ctgccggacggaagccgtgtcggcaccgacaaccgggggcatcgcgcgggcaccgacctg
acgttttcgatgcccaagagctggtcgatccttgcattggtcggaggggaccggcgcatc
ctcgatgcctatggcgcagcggtcagggagacgctggcatgggccgagaagaatctcgcc
gagacccgcatggaggtcaaaggcaaggagcgggtcgcccagaccggcaatcttgtgatc
gggctcttccagcacgacacgaaccgcaaccaggagcccaatgcgcatgttcacgccgta
gtcgccaacgtgacccaggggcccgatggcaaatggcgtgcgctcaggaacgacaagctc
tgggagcacaataccctcttgaatgccatgaccatggcgcgcttccgcttgggcgtagaa
aagcttggctaccaggtcggcgagtacggcaagcacggcaatttcgaagcggtcggcgtg
ccgaaggcggttcgcgatgccttcagttcgcgccgcgcggaaatcctcgacaagctctcg
tcgatggaaagcaaggggctggcggcccgcaatgcggcgaacctcatgacgcgggcgaac
aaggggccggtggaggatcgcggggcccttctgaaccggtggcgcgaggaagcagcgcga
cacgacttcgaccccgcgatcgtgatcgcgcaggccaatgcgcgcaccgtcaatgacatc
ggctccgtctcggggatcggcaactcggttcgcgttatcgcgcagcgcgggcgcctcttt
gccgcagccatcgccgaacggctgggcctgcgcgagggggacccgctcgtgcctctcaat
atgggcaatcgcaccccggagcagatcgcggcactccatgcggttgcgtccgccgtccgg
cacctcggggagcgcgaggcggcgttctcgcgaaccgagatctatcgcgctgcgcttggc
ttcgccttgccgacgtcgcttgccgacatcgagcgccgcgtcgatcaactgctgcgccag
ggccatctgcaaagaggcaagggcgcggaccgcgatcttgtcacgacccgcgatgccatc
gggcttgagcagcgcatcattgccgccgtcgaaagcgggcgaggacttggcgctgcgatc
gtctctgccgaagttgccggggaacgtctccaggcgctttcccagctcaaatatggcctg
agcttgaaccccggtcaggaaggggcagggcggttgctcctcgcctcgcacaaccggatc
gtcgccattcagggcgtggcgggcgcgggcaagagcaccgtcctcaaacctgtcgccgac
atcttgcgggaggaaggcaaggccgtgctcgggctcgcggtccagaacacgctcgtacag
atgctcgagcgcgaaaccggcattccctcgatgaccgttgcacgtttcctgcgccagcat
cagggcctgctcgagggtgccgatcgggcacggttggccgaagcgcgcgcctcgatgcgc
ggcaccatcgtgctgctcgacgaggcatcgatggtcggcaacgccgacaaggaaaagctc
gtgcgccttgccaatctgctccagctcgaccgcttcgccagcatcggcgacaggaagcaa
ttgggcgcggtcgatgccggcaagcctttcgacgtcatgcagaaggccggggtcgagacg
gccgtcatgaacatcaatctgcgcgcccgtggaaaggcgctgcgcgacgctcagcacgcg
gcccagggcggtcatatcgacggggcgctgcggcatctggggagccatgtcgtggaggcg
ggcaaccaggctgccgtcgaggcggcggcagcctggctttccttgtcgcccggcgaacgc
gagacgaccgcgatctatgcctcgggccgtgcgctgcgcggcgaggtcaacgaggctgtc
cagaccgggctcaaggccaatggcgagctggggcccggctctctcaagctggctgtgctg
tcgcgcgtcaatctcacgcgcgaggaactgcgttatgcgcgcagctatgctgccggaatg
gtgctggaagtaggccggcggcagagagggcaggggctgaacaaaggccgctacgaggtg
gtcgataccgaccctgcccgcgaacgcgtgacattgcggaacgagcgggggcggcacttc
gagttccggccgggtcaattgcgcccgcagggggaacaggaggcgttacgcctgttcgag
gttcggcctctcgagattcacgacggcgatcggattcgctggaccgcaaccgatcacaag
cgcggcctgctgaacgccgaccaggcccgcatcgtggcgatcgacgggaagggcgtgacg
gtgaagacctcgctcggcgccgaacaccgcctggcgcagggtgagcccatgctcgagcgt
ctcgacctcgcctatgcgctcaatgcgcatatggcgcaggggctgacctccgatcgcgga
attgctgtcatggacagccgcgagcgcaatctcgccaaccagcagacattcctcgtcacc
gttacccggttgcgcgatggcctgaccctgttcgtcgataatcccggcaagcttgaagcc
gcggttgagcgcaattccggcatgaaacgatcggcgctcgagacggtgaacctgctgcgc
gatgccgcggcttcgggcctggccaacggcagaacgccggaaccgatgcgcgaacctccc
gaactcgatcgctcgatcaccaagccgttcgaaatcggcatctag
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