Porphyrobacter sp. YT40: E2E27_12740
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Entry
E2E27_12740 CDS
T06153
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot03030
DNA replication
pot03430
Mismatch repair
pot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2E27_12740
03430 Mismatch repair
E2E27_12740
03440 Homologous recombination
E2E27_12740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pot03032
]
E2E27_12740
03400 DNA repair and recombination proteins [BR:
pot03400
]
E2E27_12740
Enzymes [BR:
pot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2E27_12740
DNA replication proteins [BR:
pot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2E27_12740
DNA repair and recombination proteins [BR:
pot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2E27_12740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QDH35111
LinkDB
All DBs
Position
complement(2723592..2724545)
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AA seq
317 aa
AA seq
DB search
MSNTNKPIAAASSAAEGRGGSQAPEERHILTPVRQREDWPKTVEGNQPLRRITVLDTETT
GLDWRRHSIIEIAVARVLVDAAGHVVGIERTGSSVNDPGHPLSPEIIALTGLTNEMVAGK
AINGEQLAAFLADGEAVVAFNAAFDRPFVDSLLPDLPPMPWGCAMADVPWRRLGFEPGPQ
GYLLMQAGKFAPRAHRAMDDVLALLELLDHVCGDGETVMAKVLAAIDGKAWRIEATSAPY
QKRDQLWERRYRFRKEMRGGGVWHKHVRPDELEAEFAWYRETIGKEPSLVELPATERYRA
DSTWTPVVPKVNKPIVW
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatacgaataaaccaatagccgccgccagtagtgcagcggaaggccgcggcgga
tcacaagcgccagaggaacgccacatcctcactccggtgcgccagcgggaagactggccg
aaaacggtagagggcaatcagcccctccgccggatcacggtccttgataccgagaccacc
ggcctggactggcgccgccactcgatcatcgagatcgctgtagcgcgggtgctggtggat
gcagcgggccacgtcgtcggcatcgagcgaaccggctcgagcgtgaacgatcccggccat
cccctgtcgccggagatcatcgcgctcaccgggctgaccaacgagatggtcgcgggcaag
gctattaatggcgagcagcttgccgccttcctcgccgacggtgaggcggtggtggcgttc
aacgcggcgttcgaccgtccctttgtcgattcgctgctgccggatctgccgcccatgccg
tggggctgcgccatggccgacgtgccctggcgccggttggggttcgaaccgggaccgcag
ggctacctgctgatgcaggcgggcaagttcgctccgcgcgcgcaccgggccatggatgac
gtgctcgcgctgctcgagctgctcgaccacgtatgcggggatggcgagaccgtcatggcc
aaggtccttgccgccatcgacggcaaggcctggcggatcgaagcgaccagcgcgccctat
cagaagagggaccagctttgggagcgacgctatcgcttccgcaaggaaatgcgtggcggc
ggcgtgtggcacaagcacgtgcgcccggacgaactcgaagccgagttcgcctggtatcgt
gagacgatcggcaaggagccgtcgctcgtcgaactccccgccaccgagcgctaccgcgcc
gacagcacctggaccccggtggtgcccaaggtgaacaagcccatcgtgtggtga
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