Porphyrobacter sp. YT40: E2E27_13355
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Entry
E2E27_13355 CDS
T06153
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00330
Arginine and proline metabolism
pot00480
Glutathione metabolism
pot01100
Metabolic pathways
pot01110
Biosynthesis of secondary metabolites
pot04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
E2E27_13355
09106 Metabolism of other amino acids
00480 Glutathione metabolism
E2E27_13355
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
E2E27_13355
Enzymes [BR:
pot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
E2E27_13355
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QDH35218
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Position
complement(2847553..2848755)
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AA seq
400 aa
AA seq
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MHIYPDASAVVRDLRPDEPVILNRPHAARRAARFFVEKFPGKVLYAVKANPAPDLIEVLW
SAGVTHYDVASITEVRLVRGILPQAVLCFMHPVKTPAAIREAYFEHGVRTFSLDSVEELA
KIIDACRSDDGEAPRDLRLCVRLRVSSEYSELSLASKFGCDLIEAPALLQEARQHCDWLG
VCFHVGSQAMTPFAFVQALDRTRAAIAEASVVIDMIDVGGGFPSAYPGLEPPPMEDYFAI
IAKHFEALPIAYNAELWCEPGRALSAEYSSMIVQVNKRRGEELYINDGAYGALYDAAHVA
WRFPVRALEDDLIEEDEDFAFYGPTCDDADYMKGPFRLPADIQAGDYIEIGMLGAYGAAM
KTGFNGYGNAQAVIVADEPMMSLFNGTRVREATDNVVSLR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
ttgcacatttaccctgacgcatcggctgtagttcgcgaccttcgtccggacgaacccgtc
atcctcaatcgcccgcacgccgcgcggcgagccgcccgtttctttgtcgagaagtttccc
ggcaaggtgctgtatgcggtcaaggccaatcccgcccccgatttgatcgaggtgctgtgg
agcgcgggcgttacccactacgatgtcgcctcgatcaccgaggtgcggctggtgcgcggg
attctgccgcaagccgtgctgtgcttcatgcacccggtgaagaccccggcggctatccgc
gaggcctatttcgagcacggcgtgcgcaccttcagcctcgattcggttgaagagctggcg
aagatcatcgacgcctgccgttccgatgacggcgaagcgccgcgcgacctgcgcctgtgc
gtgcggctgcgcgtgtcgagcgagtattcggagctcagcctcgccagcaagttcggctgc
gacctcattgaagcccccgcgctgcttcaggaagcccgccagcattgcgactggctgggc
gtgtgcttccatgtcggcagccaggcgatgactccgtttgccttcgtccaggcattggac
cgcacccgtgcggcgattgccgaggcgtcggtcgtgatcgacatgatcgacgtgggcggg
ggcttccccagcgcctatccgggcctcgaaccgccgccgatggaagattacttcgcgatc
atcgccaagcatttcgaagccctgccgatcgcctacaacgccgagctgtggtgcgaaccc
ggccgggcgctgtcggccgagtattcctcgatgatcgtgcaggtgaacaagcgccgcggc
gaggagctgtacatcaatgacggcgcctatggcgcgctctacgatgccgcccacgtcgca
tggcgcttcccggtgcgcgcgctggaagacgatctgatcgaggaggacgaggatttcgcc
ttctacgggccgacctgcgacgatgccgattacatgaagggcccgttccggctccctgcc
gatattcaggcgggcgactatatcgagatcggaatgctcggtgcttacggtgcggcgatg
aagaccggcttcaacggctatggcaatgcccaggccgtgatcgtcgcggacgagccgatg
atgagcctgttcaacggcacccgcgtgcgcgaggcgacggataacgtggtgagtctgcgc
tga
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