Porphyrobacter sp. YT40: E2E27_13630
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Entry
E2E27_13630 CDS
T06153
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00300
Lysine biosynthesis
pot00470
D-Amino acid metabolism
pot01100
Metabolic pathways
pot01110
Biosynthesis of secondary metabolites
pot01120
Microbial metabolism in diverse environments
pot01230
Biosynthesis of amino acids
Module
pot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E2E27_13630
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E2E27_13630
Enzymes [BR:
pot01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
E2E27_13630
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QDH35267
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Position
2910789..2911604
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AA seq
271 aa
AA seq
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MTQHVPFIKMHGLGNDFVVLDARETPLPQVTPSIARALGDRRTGIGFDQLVLLEPDAEHA
FRMRIFNSDGSEVEACGNAARAVALLHGAPATIATGGGPIALQPTEGGAEVDMGQPRFEW
DAIPLAYPMDTFAMPVGWENLEGPMAVNVGNPHAIFFVENADAVKLDRLGPLIETDPLFP
ERVNVNVAHLAGPDHLSLRVWERGAGLTRACGTGACATAVAAIRKGMVQSPVRVTLPGGD
LVIAWQPGGTILMRGPAATSFRGTFVWDDYA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagcatgtccccttcatcaagatgcacgggctcggcaatgatttcgtcgtgctc
gacgcgcgcgagacgccgctgccgcaggtgacgccgtccatcgcgcgcgcgctgggcgac
cgccgcaccgggatcggcttcgatcagctggtgctgctcgagcccgacgcggagcacgcc
ttccggatgcggatcttcaacagcgatggcagcgaggtcgaggcctgcggcaatgccgcg
cgcgcggtcgcgctgctgcacggcgcgcccgccaccatcgccaccggcggcgggccgatc
gccttgcagccgacggagggcggcgccgaagtcgacatgggacaaccccggttcgaatgg
gacgcgatccccctcgcctatccgatggacactttcgccatgccggtcggatgggagaac
ctcgagggccctatggcggtcaatgtcggcaatccgcacgcgatcttctttgtcgagaat
gccgacgcggtcaaactcgaccggctcggcccgttgatcgagacagatccgctcttcccc
gagcgggtgaacgtcaatgtcgcgcatctcgccgggcccgatcacctgagcttgcgcgtg
tgggagcgcggtgccggtctgacccgcgcctgcggcaccggggcctgtgccaccgccgtc
gccgcgatccgcaaggggatggtgcaaagcccggtgcgcgtcaccctgcccggcggcgat
ctcgtgatcgcgtggcagccgggcggcacgatcctgatgcgcggccccgccgcgacaagc
ttccgcggtaccttcgtctgggacgactacgcgtga
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