Porphyrobacter sp. YT40: E2E27_13850
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Entry
E2E27_13850 CDS
T06153
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pot03032
]
E2E27_13850
03036 Chromosome and associated proteins [BR:
pot03036
]
E2E27_13850
03400 DNA repair and recombination proteins [BR:
pot03400
]
E2E27_13850
DNA replication proteins [BR:
pot03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
E2E27_13850
Chromosome and associated proteins [BR:
pot03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
E2E27_13850
DNA repair and recombination proteins [BR:
pot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
E2E27_13850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
VWA_3
HU-CCDC81_euk_1
DUF2267
CATASP
Motif
Other DBs
NCBI-ProteinID:
QDH35305
LinkDB
All DBs
Position
complement(2954425..2954697)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLISAVADASGLSKSDASSAVESVFDAITKALSAGDEVRLVGFGTFSVAKRKASMG
RNPRTGAPMPIPASTQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgacctgatcagtgccgttgccgatgccagcggcctgtccaaaagcgat
gcgtcgagcgcggtggaaagcgtgttcgacgcgattaccaaggcgctttcggcgggcgat
gaagtgcggctggtgggcttcggcaccttttcggtcgccaagcgcaaggcctcgatgggc
cgcaacccgcgcaccggcgcgccgatgccgatcccggcctcgacccagccgaagttcaag
gcgggcaagggcttgaaggacgcggtcaactga
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