Porphyrobacter sp. YT40: E2E27_15570
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Entry
E2E27_15570 CDS
T06153
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00470
D-Amino acid metabolism
pot00550
Peptidoglycan biosynthesis
pot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E2E27_15570 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E2E27_15570 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
E2E27_15570 (murD)
Enzymes [BR:
pot01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
E2E27_15570 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
Precursor biosynthesis
Amino acid ligase
E2E27_15570 (murD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
MurD-like_N
VMAP-C
NAD_binding_2
Hpf1_C
Motif
Other DBs
NCBI-ProteinID:
QDH35606
LinkDB
All DBs
Position
complement(3296020..3297390)
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AA seq
456 aa
AA seq
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MITSPAFAGKRYAVLGLARSGAAAAEALLASGAEVIAWDRQPHAREPFEGRCRMIDPLEL
DLTGFAGVVVSPGVPLNSHPIGPHVWQYGLPVIGDIELFAMARDALPQHKVVGITGTNGK
STTTALVHHILQTAGVPTVMGGNIGDPVLGQEPLPDGGVYVLELSSFQIDLTFTLDCDVA
ALTNITPDHLDRYASFAAYAASKERLFQMQHTGTALICVEDEQTIAIAEGLETSGKLLVR
VKTGDLAAAGLAEGRSPSLAGPHNAQNAAVAVAICRQLGLADAQIAEGLASYRGLPHRME
RVCDAGGVIYINDSKATNAASAAPALAAFPPDPDVNGGAPRIHWIVGGLPKEDGLGACAD
HLGNVAAAYTVGEAGPMFADLLEGQVRVERCELISEAVRRAAEAARPGDVVLLSPACASY
DQFRDYEKRGHHFSQMVRAITGCDAGPDEAGRSILP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacctcccccgcctttgccggaaaacgctacgcggtgctcggcctcgcgcgctcg
ggcgcggcggcggccgaggccttgctggcgagcggcgcggaggtgatcgcctgggaccgg
cagccccacgcgcgcgagccgttcgaggggcgctgccggatgatcgacccgctggagctc
gatctcaccggctttgcgggcgtggtggtctcgcccggcgtgccgctcaattcgcacccc
atcggcccgcacgtgtggcaatatggcctgcccgtgatcggcgatatcgaactgttcgcg
atggcgcgcgacgcgctgccgcagcacaaggtggtcgggatcaccggcaccaacggcaag
tccaccacaaccgcgctggtgcatcacatcctgcagacggcgggtgtgcccaccgtgatg
ggcggcaatatcggcgatccggttctcgggcaggaaccgctgcccgacggcggcgtctat
gtgctggagctgtcgagcttccagatcgatctcaccttcacgctcgattgtgatgttgcg
gcgctgaccaacatcacgcccgatcatctcgatcgctatgccagctttgccgcttatgcc
gcttccaaggagcggctgttccagatgcagcacaccggcacggcgctgatctgtgtcgag
gacgagcagacgatcgcgattgccgaggggctggaaacctcgggcaagctgctggtgcgg
gttaagaccggcgatctcgctgcggccgggctggccgaggggcgctcgccctcgctcgcc
gggccgcacaatgcccagaacgccgccgtcgcggtggcgatctgccgccagcttggcctt
gccgatgcgcagattgccgaggggctcgcctcctatcgcgggctgccgcaccggatggag
cgcgtgtgcgacgcgggcggggtgatctacatcaacgacagcaaggcaaccaacgccgca
tccgccgccccggcgctcgcggcctttccgcccgatcctgacgtgaacggcggcgcgccc
cggattcactggatcgtcggcggattgcccaaggaagacgggctgggcgcctgcgccgac
catctcggcaatgtcgcggcggcctataccgtgggtgaggcagggccgatgtttgccgac
ctgctcgaagggcaggtcagggtcgagcgctgcgagctgatcagcgaagccgtccgccgc
gccgccgaagctgcgcgtcccggtgacgtcgtgctgctcagcccggcctgcgcctcttac
gaccagttccgcgactacgagaagcgcgggcaccacttcagccagatggtgcgcgcgatc
accggctgcgacgctggcccggacgaggccggtcggagcatcctgccatga
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