Porphyrobacter sp. YT40: E2E27_18100
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Entry
E2E27_18100 CDS
T06153
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pot03000
]
E2E27_18100
Transcription factors [BR:
pot03000
]
Prokaryotic type
Helix-turn-helix
LysR family
E2E27_18100
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_30
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QDH36366
LinkDB
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Position
pYT40:85886..87055
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AA seq
389 aa
AA seq
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MERLDVNLRHLRAFLAIMESGSVTAAAREVHLTQPAVTQGIAKLELRFGVPLFERQPRRM
IPTDEARILAPRATAIIRLLGQTRATAAQVSAFLGLSRAGSYANAATAMGLSEASLHRAV
SDLSLALGQDLVRRRGKGVVLTARGLAMARNFRLALAELRSADIELAALRGHERGRITIG
AMPLSRARLLPSAVAAFHRAKPDIDIVIMEGSYAELTGPLRDGDIDMMVGAARTNISADM
AQRELFDDPLIILAGAHHPLAQARRPPTIAALARYPWIVAAAGTPLRAHWQSMFEEVGVT
PPRVPMECGSVMIVRQILVESDFLTLLSPDQVSVELEAGWLVRIAGPVRPMSRTIGLTVR
SDWRPTPAQAALIEVIEEQAAVLRDEHTS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaacggctggacgtgaatctgcggcatctgcgcgcctttctggcgatcatggaaagt
ggaagcgtgacggcagccgcgcgtgaggttcaccttacccagcctgcagtgacgcaggga
atcgccaagctggagttgcggttcggggtgccgcttttcgaacggcagccgcgccgcatg
atccccacggatgaggcacgaatcctggcgccgcgcgctaccgcgatcattcggcttctg
gggcaaacgcgcgcgacggcggcgcaggtttccgcttttctcggcttatcgcgagcggga
agttatgcaaatgctgcgacggccatgggtctgagcgaagcatcgctgcatcgggcggtg
agcgacctttcgctcgctttgggacaggatcttgtgaggcggcgcggcaagggtgttgtc
ctgacggcgcgcggcttggcgatggcgcgcaatttccggctcgcgcttgccgagcttcga
tcggcggatattgagctggccgcattgcgaggccacgaaagagggcgcatcacgatcgga
gcgatgccgctttcgcgtgcgcgcctgttaccgagcgccgtcgcagcgtttcatcgcgcg
aagccggatatcgatatcgtcatcatggagggctcctatgccgagctgacggggccgctg
cgtgacggcgatatcgatatgatggtcggtgcggcgaggacaaatatatcggcagatatg
gcacagagagaacttttcgacgatccgctcatcattcttgccggcgcgcaccacccgctg
gcgcaggcccgccggcccccgacgattgcggcgctcgcgcggtatccatggatcgtggcc
gcggctggtacgccgttaagggcgcattggcagtcgatgttcgaggaggtcggcgttacg
ccaccacgcgtgccgatggaatgcggctcagtcatgatcgtccggcaaattcttgtcgaa
agcgatttcctcactctgctgtcgcccgatcaggtcagtgtggaactggaggcggggtgg
ctcgtgagaattgcaggcccggtgcgtccgatgtcgcgcaccatcggtttgaccgtccga
tcggattggcggcctacgccggcacaggctgctctgatcgaggttatcgaggaacaggcc
gcagtgctgcgcgacgaacacacttcgtaa
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