Plecotus auritus (brown big-eared bat): 308233776
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Entry
308233776 CDS
T11911
Symbol
RAG1, AC0HY7_000609
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots04068
FoxO signaling pathway
pots05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
308233776 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
308233776 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pots04121
]
308233776 (RAG1)
Enzymes [BR:
pots01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
308233776 (RAG1)
Ubiquitin system [BR:
pots04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
308233776 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
308233776
NCBI-ProteinID:
XP_080496859
LinkDB
All DBs
Position
9:complement(<144985955..>144989086)
Genome browser
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSLEKAPEEAHTEKEDSSEGKLPLE
QSPAVLDKAGDEKPALTQPALKPHPKFLRKSHDDGKARDSAIHQANLRHLCRICGNSFKS
GEHSRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHNCW
SIMHRKFSGAPCEVYFPRNATMEWHPHTPSCDICHTAHRGLKRKGREPNVQLSKKLKTAL
DRARQARQRKKRGQARTSSKEVMKQIANCGKIHLSTKLLAVDFPAHFVKSVSCQICEHIL
ADPVETNCKHVFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLVVKCPA
PECNEEVSLEKYNHHVASHKDSKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRINTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMKAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTVMRITIAHGSQDVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSELMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHAENLERYEVWRSNPYHESVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYRNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHDALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNSGFTIN
SQASLEDPLGLEDSLETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccactctgggactcagttcggccccagatgaaatccagcac
ccacatattaaattttcagaatggaaatttaagctgttcagggtgagatccttagaaaag
gcacccgaagaagctcacacggaaaaggaagattcctctgaggggaaactccctctagag
cagtctcctgcagtcctggacaaggctggtgatgagaagccggccttgacgcaaccagca
ttaaagcctcaccctaagtttctgaggaaatcccatgacgatgggaaggcaagagacagc
gccatccaccaagccaaccttcggcatctctgccgcatctgtgggaattcttttaaaagt
ggtgaacacagcaggagatatccagtccacgggcccgtggatggtaaaactcaagtcctt
ctacgaaagaaggaaaagagagccacttcctggccagacctcattgccaaggttttccgg
atcgatgtgaaggcagatgttgactccatccaccccactgagttctgccataactgctgg
agcatcatgcacaggaagttcagcggcgccccatgcgaggtctacttcccgaggaatgca
accatggagtggcacccccacacaccgtcctgtgacatctgccacaccgcccatcggggg
ctcaagaggaagggtcgtgagccaaatgtgcagctcagcaaaaaactcaaaacggcgctt
gaccgagcaagacaagcacgtcagcgcaagaagagaggccaggcaaggaccagtagcaag
gaagtgatgaagcagatcgccaactgcggtaagatccaccttagtaccaagctccttgct
gtggacttcccggcccactttgtgaaatctgtctcctgccagatttgtgaacacattctg
gccgaccccgtggagaccaactgtaagcacgtattttgcaggatctgcattctcagatgc
ctcaaagtcatgggcagctattgtccctcttgcagatatccctgcttccctactgacctg
gagagtccagtgaagtcctttctgagcatcttgaattccctggtggtgaaatgtccagca
ccagagtgcaatgaggaggtcagcttggaaaaatataatcaccacgtagcaagccacaag
gactccaaagagacttttgtgcatattaataaaggaggccggccccgccagcatctcctg
tccctgacccggagggctcagaagcaccgtctgagggagctcaaactacaagtcaaggcc
tttgctgacaaagaagaaggcggagatgtcaagtccgtgtgcctgaccttgttcctgctg
gcactgagggcgagaaacgagcacagacaggccgatgagctggaggccatcatgcaggga
cgtggctctggcctgcagccagctgtgtgcttggccatccgcatcaacaccttcctcagc
tgtagtcagtaccacaagatgtacagaacagtaaaagccatcacagggaggcagattttt
cagcctttgcacgcccttcggaatgctgagaaggtccttctgccgggctaccaccccttc
gagtggcagccacctctgaagaacgtgtcttccagcaccgacgtgggcattattgatggg
ctgtctggactgtcctcctctgtggatgactaccccgtggacaccattgcaaagcggttt
cgctatgattcagcgttggtgtctgctctgatggacatggaagaagacatcttggaaggc
atgaaagcccaagacctcgatgattacctgaatggccccttcaccgtagtggtgaaggag
tcttgtgacggaatgggagatgtgagtgagaagcatgggagtgggccagcggtccctgaa
aaggcggtccggttctcattcacagtcatgaggattaccatagcccatggctcacaggat
gtgaaggtgtttgaggaagccaagcctaactctgaactgtgttgcaagcccttgtgcctt
atgctggcagatgagtccgaccacgagaccctgacggccatcctgagccctctcattgcc
gagagggaggccatgaagagcagcgaattaatgctggagatgggaggcatcctccggact
ttcaagttcatcttcaggggcaccggatatgatgagaaacttgtccgtgaagtggaaggc
ctggaggcgtctggttccgtctacatctgcaccctttgtgatgccacccgcctggaggct
tctcaaaaccttgtcttccactccataaccagaagccatgccgaaaacctggagcgctat
gaggtctggcgatccaacccctaccacgagtctgtggaagaactccgggatcgggtgaaa
ggggtctcggccaagcccttcatcgagacagtcccttccatagatgcactccactgtgac
attggcaatgcggccgagttctacaagatcttccagctagagataggggaggtgtatagg
aatcccaacgcctcgaaggaggagaggaaaaggtggcaggccacgctggacaagcatctc
cggaagaagatgaacctcaaacccatcatgaggatgaatggcaactttgccaggaagctc
atgaccaaagagactgttgaggccgtttgtgagttaattccctctgaggagaggcatgat
gctctgagggagctgatggacctttacctgaagatgaaacccgtgtggcgatcgtcatgc
ccggctaaagagtgcccagaatccctctgccagtatagtttcaattcccagcgttttgct
gagctcctctccaccaagttcaagtatagatacgagggcaagatcaccaattattttcac
aaaaccctggcacacgtccctgaaattattgagagggatggctccatcggggcctgggca
agtgagggcaatgagtctggcaacaaactgttcaggcgcttccggaaaatgaatgccagg
cagtcaaagtgctacgagatggaagatgtcttgaaacatcactggctgtatacctccaaa
tacctccagaagtttatgaatgctcacaatgcattaaaaaactctgggtttaccataaac
tcgcaggcaagtttagaggacccattaggcctagaggactctctggaaactcaagattca
atggaattttaa
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