Plecotus auritus (brown big-eared bat): 308233954
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Entry
308233954 CDS
T11911
Symbol
PATL1, AC0HY7_000787
Name
(RefSeq) protein PAT1 homolog 1 isoform 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
308233954 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308233954 (PATL1)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308233954 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
308233954 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
308233954
NCBI-ProteinID:
XP_080497175
LinkDB
All DBs
Position
9:134646757..134681272
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AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQSQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCNV
PNSSLLGHPFPPSVPPVLTPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPLMQNLRSQAPVFRADTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEELQGDGPKKERTKLITPQVAKLEHAYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQL
MNLPQSAAAPAPSNPHLTTVLQNKFGLSLLLVVLSRGEDLQSSDPATESTENNQWMQVMF
MATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaggatgcatttcaa
ggcctgggagaggaagatgaagaaattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgactggctgaattggaagagaagcta
ccggcagcagtcaatgaacaaacaggcaatggagaaagggatgagatggacttattgggt
gaccatgaggaaaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagccatcatgagggcagtgcagaccaggccagttttgcaatcccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccattgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccacag
ggcccagaagatgatcgggacctttccgagcgtgcattaccaaggcggtcaacttcacct
atcattgggagccctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccagcagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccaccacgttatcctgctccctatggtgagaggatgtctccaaaccagctctgcaatgtc
ccgaactcttccctactgggtcaccctttccctcctagtgttcctccggttctcaccccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgcttgctgccatgaatcccaagctg
ctgcaagggcgagttgggcagatgcttcccccagcaccaggcttccgtgccttctttagt
gctccacctcctgctacaccacctcctccacagcagcacccccctggcccaggacctctc
atgcaaaacttacgatctcaggccccagtgtttagagcagacaccactcatcttcatcca
cagcaccgtcgacttttgcatcagagacagcaacagaatagaaatcagcatcggaatctc
aatggtgcaggagatagaggaagtcaccggagcagtcaccaagatcatctccggaaggat
ccatatgccaatctcatgttgcagcgagaaaaggactgggtctccaaaatccagatgatg
caactgcaaagcactgatccctacctggatgatttttattaccagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaattacaaggtgatggtcctaaaaaggagcgcacc
aagctcattacccctcaggtggccaaactggagcacgcctacaagccagtgcagtttgag
ggctctttgggaaagcttaccgtctctagtgtgaataatccccggaaaatgattgatgct
gttgtgacatctcggagtgaggatgatgaaacaaaagaaaaacaggttcgggacaagaga
cgaaaaacccttgtcataattgagaaaacctacagtttgctcctggatgtggaggattat
gaaaggcgttacctcctaagtctagaagaagagagacctgccctgatggatgaaagaaag
cacaaaatttgcagcatgtatgacaacttaaggggaaaattacctggacaagagaggcca
agtgatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgc
attctccctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctcccattccttatcaagaaggatgcacaagatgaggtgctgccatgcttattgagtccc
ttctccctcctcctctatcatcttccgtcagtgactgtcaccagccttctgcaacagcta
atgaacctacctcagagtgcagctgcaccagcaccctctaatcctcacctcactactgtt
ctccagaacaagtttggcctgtcgctgctcctcgttgtcctgagccgtggggaagaccta
cagagttcagaccctgctacagaatcaacggaaaacaaccagtggatgcaagtgatgttc
atggcaacccgagaacttctgaggattccccaggcagccctggccaagccaatctctatc
cccacaaacctagtatccctcttttctcgctatgttgatcgacagaaactgaatttgctg
gagacaaaactgcagctagttcaggggatacgataa
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