Plecotus auritus (brown big-eared bat): 308234338
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Entry
308234338 CDS
T11911
Symbol
NXF1, AC0HY7_001171
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03008
Ribosome biogenesis in eukaryotes
pots03013
Nucleocytoplasmic transport
pots03015
mRNA surveillance pathway
pots05014
Amyotrophic lateral sclerosis
pots05164
Influenza A
pots05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308234338 (NXF1)
03015 mRNA surveillance pathway
308234338 (NXF1)
03008 Ribosome biogenesis in eukaryotes
308234338 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
308234338 (NXF1)
05168 Herpes simplex virus 1 infection
308234338 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308234338 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308234338 (NXF1)
03009 Ribosome biogenesis [BR:
pots03009
]
308234338 (NXF1)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
308234338 (NXF1)
mRNA cycle factors
Stress granule specific factors
308234338 (NXF1)
Ribosome biogenesis [BR:
pots03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
308234338 (NXF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_4
UBA_8
LRR_8
RRM_NXF1-2
Citrulline_exp
Motif
Other DBs
NCBI-GeneID:
308234338
NCBI-ProteinID:
XP_080498043
LinkDB
All DBs
Position
9:152707373..152719110
Genome browser
AA seq
618 aa
AA seq
DB search
MADGGKSYNEHDDRVSFPQRRKKGRGPFRWKCSEGNRRSGRGGTALRTARLEDDDRDVAM
SDAQDVPRVRYNPYAVRPNRRVDNWHDRDRIHVTVRRDRVPPQRGGAGSSQDGTSKNWFK
ITIPYGRKYDKSWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAVNYKILD
QENRRISIIINSSPPPLTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRLDPDLVAQ
NIDVVLNRRSCMAATLRIIEENIPELLSLNLSSNKLYRLEDMSSIVQKAPNLKILNLSGN
ELKSERELDKIKGLKLEELWLEGNTLCDTFRDQSTYISAVRERFPKLLRLDGHELPPPIA
FDVEAPTMLPPCKGSYFGTEALKNLVLHFLQQYYAIYDSGNRQRLLDAYHDGACCSLSIP
FTPQNPARSNLGEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVV
DISAQTNTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASNSGLCIVNDELFVRNASP
DEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQ
AFTHLKAKGEIPEVAFMK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagggaagtcatacaacgagcacgatgatcgagttagtttccctcaaaga
aggaagaaaggccggggtcctttccggtggaagtgtagtgaggggaaccgcaggtctggg
agaggcggcactgcccttcggacggcccgcctcgaggacgatgacagagacgtggcgatg
agtgatgcccaggatgttccccgagtgcgatacaacccctatgctgtgcgacccaaccgt
cgggttgataattggcatgatcgagaccgaattcatgttactgtgcggagagacagagtt
cctccacagagaggaggggctggcagcagccaggatgggacctcgaagaactggtttaag
attacaattccttatggcaggaaatatgacaagtcatggctcctaagtatgattcagagc
aaatgcagtgtccctttcacccccattgagtttcactatgaaaacacacgagcccagttt
tttgttgaggatgccagtactgcctctgcgttaaaggctgtcaactataagattttggat
caggagaacagaaggatatctatcatcatcaactcctctcctccgccccttactgtacag
aatgaactgaagccagagcaagtggagcagctaaagctgatcatgagcaaacgatacgat
ggctcccaacaagcgcttgacctcaagggcctccgtttagacccagatttggtggcccag
aacattgacgttgtcctgaatcgcaggagctgcatggcggcgaccctgcggatcattgag
gagaacatccctgagctgttgtccttgaacttgagcagtaacaagctataccggctggaa
gacatgtccagcattgtgcagaaagcacccaacctaaagatcctaaacctctctggaaac
gagttgaaatctgagcgggaattggacaagataaaagggctgaagctagaagagctgtgg
ctcgaaggaaacacgctgtgtgacaccttccgagaccaatccacctacatcagcgccgtt
cgtgaacgatttcccaaattactacgtttggacggccatgagttacccccgccaattgcc
tttgacgttgaagcccccacgatgttgccaccctgcaaggggagctattttggcacggag
gccctgaagaacctggtcctgcacttcctgcagcagtactatgcaatttatgactctggg
aaccggcagcggctcctggatgcctaccatgacggagcctgctgctccctgagcatccct
ttcaccccccagaaccctgcccgaagcaacttgggcgagtacttcaaggatagcaggaat
gtgaagaaactgaaagacccgaccctgcgcttccggctgctgaagcacacgcggctcaac
gtggttgccttcctcaacgagttgcccaagactcagcacgacatcaattcctttgtggtc
gacataagtgcccagacgaacacgttactgtgtttttctgtcaatggagtcttcaaggaa
gtggatggaaagtcccgggattctttgcgagccttcacacggacgtttgtcgctgtccca
gccagcaattcagggctgtgcattgtaaacgacgagttgtttgtgcggaatgccagccct
gacgagatccaaagagctttcgccatgcctgcgcccacgccctcctccagcccggtgccc
accctgtccccagagcagcaggaaatgctgcaggcattctccacgcagtctggcatgaac
ctcgagtggtcccagaagtgcctgcaggacaacaactgggactacacccgatctgcccaa
gcctttacgcatctcaaggccaagggtgaaatcccggaagtggcgttcatgaagtga
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