Plecotus auritus (brown big-eared bat): 308234997
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Entry
308234997 CDS
T11911
Symbol
UPF2, AC0HY7_001830
Name
(RefSeq) regulator of nonsense transcripts 2 isoform 1
KO
K14327
regulator of nonsense transcripts 2
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03013
Nucleocytoplasmic transport
pots03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308234997 (UPF2)
03015 mRNA surveillance pathway
308234997 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308234997 (UPF2)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
308234997 (UPF2)
mRNA cycle factors
P-body specific factors
308234997 (UPF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
308234997
NCBI-ProteinID:
XP_080499694
LinkDB
All DBs
Position
1:101519008..>101651845
Genome browser
AA seq
1272 aa
AA seq
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MPAERKKPASMEEKESLLNNKEKDCGERRPVSSREKPKDEIKLPAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFSGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYVDFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLIPRKVKSAAEKFNLTFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESNKDDSKAEAKEPKDNKEVSNPDDLELELENLEINDDTLELEGADEA
EDLTKKLLDEQEQEDEETSTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKAN
RKKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINI
ETKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPES
HLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYIRKLLY
KDLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQED
VGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFG
VNPDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLE
VWTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSK
DSMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDEEEGEEEEEENTDYLT
DSNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDV
AIPLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWN
QQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPN
ADLIFKTGGRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccggcaagtatggaagaaaaagaatctttgctaaacaac
aaggaaaaagattgtggtgaaaggcggccagtgagcagcagggagaaaccaaaagacgag
atcaagctccctgccaagaaagaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggta
aaggcagaagaggaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaggaa
gagagaaagaagcaggaagagcaggcaaaacgacagcaagaggaagaagctgcccagttg
aaagagaaagaggaatctcttcagcttcatcaggaagcatgggaacgacatcagttaaga
aaggaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaactatc
acggaacaacagcgagactccttgtcccatgattttagtggcctaaatttaagtaaatac
attgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaattgt
gctgtgcacttatgctctctgtttcaccagcgctatgtcgactttgctccatcacttctg
caggtttggaaaaaacattttgaagcaaggaaagaagaaaaaacacctaacattaccaaa
ttaagaactgatttacgttttattgcggaattgacaatagttgggattttcactgacaag
gaaggtctttctttaatctatgaacagcttaaaaatattattaatgctgatcgggaatca
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttataccaaggaaagtaaagagtgctgcagagaagtttaatttgacttttcctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagaatactttaca
tctttgaccaaacatctgaaaagggaccacagggagctacagaatactgagaggcaaaac
aggcgtattctgcattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcaatccttagcagatcttttggat
gaaaatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttctatgagaacctcattgatttaaaagcttttgttccagccatc
ttatttaaagataatgaaaaaagttgtcagaataaagagtccaacaaagatgattctaaa
gcagaggcaaaagaacctaaagataataaggaggtatcaaatcctgatgatttagaactt
gagttggagaatctagaaattaatgatgacaccttggagttagagggtgcagatgaagct
gaagatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaaaccagcact
ggatctcatctgaagctcatagtagatgcttttctccagcaattgcccaactgtgtgaac
cgagatctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaat
aggaagaagttggtacgggcactctttatagttcccagacaaaggttggatttgctacca
ttttatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctt
tgttccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatatt
gaaacaaagaacaaaactgttcgttttattggagaactaactaaatttaagatgttcaca
aaaaatgatacactgcattgtttaaagatgcttctatcagacttttcccatcaccatatt
gaaatggcatgtaccctattggaaacatgtggaagatttcttttcagatctccagaatct
cacttgaggaccagtgtgcttttggaacaaatgatgagaaagaaacaagcaatgcatctt
gatgcaagatatgtcacaatggtagagaatgcatattactactgcaacccacctccagcc
gaaaaaacagtgaaaaagaaacgtcctcctctccaggaatatatccggaaacttttgtac
aaggatctctccaaggtcaccactgagaaggttttgagacagatgcgaaagttgccctgg
caggaccaagaagtgaaagattatgttatttgttgtatgataaacatctggaatgtgaaa
tataatagtattcattgtgtggcaaacctcttagcaggactagtgctctaccaagaggat
gttggaatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaat
caacctaaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttataat
taccgcatggtggaatcagctgttatttttagaactctttattcttttacttcatttggt
gttaatcctgatggctctccaagttcactggaccctcctgagcaccttttcagaattaga
ctagtgtgtactattttggatacttgtggccagtactttgacagaggttccagtaaacga
aaacttgattgcttccttgtatattttcagcgttatgtttggtggaagaaaagtttggag
gtttggacaaaagatcatccatttcctattgacatagattacatgatcagtgatacacta
gaactgctaagaccaaagatcaaactttgtaattctctggaagaatccatcaggcaggta
caagacttggaacgagaattcttaataaaactaggcctagtaaatgacaaagattcaaaa
gattctatgacagaaggagaaaatcttgaagaggatgaagaagaagaagaaggaggagct
gaaacagaagaacaatctggaaatgaaagtgaagtaaatgaaccagaagaagaggagggt
tctgataatgatgaggaagaaggagaggaagaagaggaagagaatacagattatcttaca
gattcaaataaggagaatgaaactgatgaagaaaatactgaggtgatgatcaaaggaggt
ggacttaagcatgtaccttgtgtagaagatgaggacttcattcaagctctggataaaatg
atgttagaaaatcttcagcaacgaagtggcgaatctgttaaggtgcaccaacttgatgtt
gctattcccttgcatctcaaaagtcagctgaggaaagggcccccacttggtggtggagaa
ggagaggcagagtctgcagatacaatgccatttgtcatgttaactagaaaaggcaataaa
caacagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggaac
cagcaacaggcagaacaagaagaaaggatgagaatgaaaaagctcactctagatatcaat
gaacgacaagaacaagaagattatcaagaaatgctgcagtctcttgcccagcgcccagct
ccagcaaacaccaatcgtgagcggaggccccgttaccaacatccaaagggagcgcctaat
gcggatctaatctttaagactggtgggaggagacgttga
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