Plecotus auritus (brown big-eared bat): 308235541
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Entry
308235541 CDS
T11911
Symbol
SMG9, AC0HY7_002374
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform 1
KO
K18735
protein SMG9
Organism
pots Plecotus auritus (brown big-eared bat)
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308235541 (SMG9)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
308235541 (SMG9)
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GFIT
Motif
Pfam:
Smg8_Smg9
BrxC-PglY_N
AAA_30
Motif
Other DBs
NCBI-GeneID:
308235541
NCBI-ProteinID:
XP_080500571
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All DBs
Position
10:15929842..15954400
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AA seq
521 aa
AA seq
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MSESGHSQPGPYGLERRRRWKEPGPGGPQNLSGPGGRERDYIAPWERERRDGSEETGASI
MQKTPIILSKPPAERSKQPPPPAAPAAPPAPAPLEKPIVLMKPREEGKGPAAATNASAPE
GTTPPPPAAPVLPKGEKEGQRPTQPVYQIQNRGMGTAAPAVMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRAYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLMPFMDSEAESENPPRAAGPSSSPLFSLLPGYRGHPSFQSLVSKLRSQVMS
MARPQLSHTILTEKNWFHYAARIWDGVKKSSALAEYSRLLA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctggtcacagtcagcctgggccctatggtctagagaggcggcgacggtgg
aaggagcctggccccggcggcccccagaatctctctgggcctggtggtcgggagagggat
tacattgcaccatgggaaagagagagacgggatggcagcgaagagacaggtgcctccatc
atgcagaaaacccccatcatcctctccaaacctccggcagagcggtcaaagcagccacca
cctccagcagcccctgctgccccacctgccccagcccctcttgagaagcccatcgtcctc
atgaaaccacgggaggagggcaaagggcctgcagccgcaacaaatgcctcagcccccgag
ggcaccaccccaccaccccctgcagcccccgtgctacccaagggggagaaggaggggcag
agacccacccagcctgtgtaccagatccagaaccggggcatgggcactgccgcgccagca
gttatggaccctgtcgtgggccaggccaaactgctgcctccagagcgcatgaagcacagc
atcaagttggtggatgaccagatgaattggtgcgacagtgccattgagtacctgctggat
cagactgatgtgttggtggttggtgtcctgggcctccaggggacaggcaaatccatggtc
atgtcattgttgtcagccaacactcctgaggaggaccagagggcgtatgttttccgggcc
cagagcgctgaaatgaaggaacgagggggcaaccagaccagtggaatcgacttctttatt
acccaagagcggattgttttcctggacactcagcctatcctgagtccctccatcttggac
catctcatcaacaatgaccgcaagctgcctccagagtacaacctgccccacacctatgta
gagatgcagtcactccagattgccgccttccttttcacggtctgccacgtggtgattgtc
gtccaggactggttcacggacctcagtctatacaggttcctgcagacagcagagatggtg
aagccctctaccccatcccccagccacgagtccagcagctcatcaggctctgatgaaggc
actgagtactaccctcacttggtgttcctacagaacaaagctcgccgagaggacttctgt
cctcgaaagctgcggcagatgcacctgatgatcgaccagctcatggctcactcccacttg
cgttacaagggtactctgtccatgttacagtgcaacgtcttccctgggctcccccctgac
ttcctggactctgaggtcaacttgttcctgatgccctttatggacagcgaagcggagagt
gaaaacccaccaagagctgcaggacccagctccagcccactcttctccctactcccgggg
taccgtggccaccccagcttccagtccttggtaagcaaactccggagccaagtgatgtcc
atggcccggccgcagctgtcgcacacaatcctcaccgagaagaactggttccactatgcg
gcccggatctgggacggggtgaaaaagtcctctgccctggcagagtatagccgtctgctg
gcctga
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