Plecotus auritus (brown big-eared bat): 308236568
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Entry
308236568 CDS
T11911
Symbol
SOX17, AC0HY7_003401
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
308236568 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pots03000
]
308236568 (SOX17)
Transcription factors [BR:
pots03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
308236568 (SOX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
308236568
NCBI-ProteinID:
XP_080502525
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All DBs
Position
11:30149392..30151582
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AA seq
406 aa
AA seq
DB search
MSSPDAGYASDDQSQTRIALPAVMAGLGPCSWAESLSPLGDVKVKGEAAASSGAPAGAAG
RGKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG
LPFPDQGFPAGAPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVDPDPAFFAAP
LPGDCPAAGPYSYAQASDYAGPPEPSGGPMHSRLGPEPAGHAMPGLLAPPSALHMYYGAM
GSPAAGSGRGFPMQPQQHPPGPGQPSPPPEALSCRDGADASQPAELLGEMDRTEFEQYLH
YVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccagacccggatcgcgctg
cccgcggtgatggccgggctgggcccctgctcctgggccgagtcgctgagtcccctcggg
gacgtgaaggtgaagggcgaggcggcggcgagcagcggggcgccggccggggccgcgggc
cggggcaagggcgagtctcgcattcggcggccgatgaacgccttcatggtgtgggcgaag
gacgagcgcaagcgcctggcgcagcagaaccccgaccttcacaacgccgagctgagcaag
atgctgggcaagtcgtggaaagcgctgacgctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
cggcgaaagcaggtgaagaggctgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccgcaggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttccccgaccaggggttccccgcgggcgcgccgctgctgcccccgcacatgggc
ggtcactaccgcgactgccagggcctgggagcgcccccgctcgacggctacccgctgccc
acgcccgacacgtctcccctggacggtgtggatccggatccggccttcttcgccgcgccg
ctgcctggagactgtccggcagcgggtccctacagctacgcgcaggcctcggactacgcg
gggcccccggagccttccggcggcccgatgcactccaggctcggcccggagcccgcaggc
catgccatgccgggcctcctagcgccccccagcgccctacacatgtactacggcgccatg
ggctcacccgcggccggcagcgggcgcggcttcccgatgcaaccacagcagcacccgccg
ggcccagggcagccgtcgccccctcccgaggcgttgtcctgccgggacggtgcggacgcg
agccagcccgccgagctcctcggggagatggaccgcacggaatttgaacagtacctgcac
tatgtgtgcaagcccgagatggggctcccttaccagggacacgactcgagtgtgaacctc
cctgacagccacggggccatttcctccgtggtgtccgatgccagctctgcggtatattac
tgcaactaccctgacgtttga
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