Plecotus auritus (brown big-eared bat): 308238474
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Entry
308238474 CDS
T11911
Symbol
RFC5, AC0HY7_005307
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03030
DNA replication
pots03410
Base excision repair
pots03420
Nucleotide excision repair
pots03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308238474 (RFC5)
03410 Base excision repair
308238474 (RFC5)
03420 Nucleotide excision repair
308238474 (RFC5)
03430 Mismatch repair
308238474 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pots03032
]
308238474 (RFC5)
03036 Chromosome and associated proteins [BR:
pots03036
]
308238474 (RFC5)
03400 DNA repair and recombination proteins [BR:
pots03400
]
308238474 (RFC5)
DNA replication proteins [BR:
pots03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
308238474 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
308238474 (RFC5)
Chromosome and associated proteins [BR:
pots03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
308238474 (RFC5)
DNA repair and recombination proteins [BR:
pots03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
308238474 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
308238474 (RFC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_11
AAA_22
AAA_16
AAA_assoc_2
RuvB_N
DUF815
AAA_14
DEAD
nSTAND_NTPase5
AAA_lid_RFC1
ResIII
AAA_5
TIP49
ATPase_2
AAA_19
TniB
PhoH
AAA_30
AAA_7
nSTAND3
DNAX_ATPase_lid
IstB_IS21
Thioredoxin_6
bpMoxR
NPHP3_N
ABC_tran
AAA_3
AAA_28
Motif
Other DBs
NCBI-GeneID:
308238474
NCBI-ProteinID:
XP_080506514
LinkDB
All DBs
Position
13:complement(7607657..7618726)
Genome browser
AA seq
337 aa
AA seq
DB search
METSAHQQPSASKIRNLPWVEKYRPQTLSDLISHQDILSTIQKFIREDRLPHLLLYGPPG
TGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVI
LDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMV
PRLEHVIEEEKVDVSEDGMKALITLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPL
KSDIANILDWMLNQDFTTAYRNIVELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLT
KMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVSEA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctcagcgcaccagcagccctcggcgtccaagatcaggaacctgccctgggtt
gaaaaataccggccacagacactgagcgatctcatttctcatcaggacattttgagtacc
attcagaaatttatcagggaagaccgactgccacacctacttctctatggtcctccgggg
acaggaaagacgtccaccatcctggcctgtgctaaacagctgtacaaagataaagaattc
ggctccatggtcttggagctgaatgcttcagacgacagaggaatagacatcgttcgggga
ccaatcctgagctttgctagcacaaggacaatatttaagaaaggctttaagctggtgatc
ctggatgaggcggatgccatgactcaggacgcccagaatgccttgaggagagtgatcgag
aaatttactgaaaataccagattttgcctcatttgtaactatctgtcaaagatcatcccc
gctctgcagtcccggtgtacaaggttccgattcggtcccctgacccctgagctcatggtc
ccgcgcctggaacatgtcatagaagaagagaaagttgatgtaagtgaagatgggatgaaa
gcacttataactctctccagtggagatatgcgacgggctctgaacattttgcagagcacc
aacatggcctttgggaaggtgaccgaggagactgtctacacctgcacagggcacccgctc
aagtcagacatcgccaacatcctggactggatgttgaatcaagacttcaccacggcctac
agaaatatcgtggagctgaagactctgaaggggttggcattacatgacatcctgacggag
atacacttgtttgtgcatagagttgactttccatcttcagttcgaatacacttattgacc
aaaatggcagacattgagtacaggctttctgtgggcaccaacgagaagattcagctgagc
tccctcattgcagcttttcaagtcaccagagacctgattgtctcggaggcctag
DBGET
integrated database retrieval system
