Plecotus auritus (brown big-eared bat): 308238530
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Entry
308238530 CDS
T11911
Symbol
ATXN2, AC0HY7_005363
Name
(RefSeq) ataxin-2 isoform 2
KO
K23625
ataxin-2
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots05014
Amyotrophic lateral sclerosis
pots05017
Spinocerebellar ataxia
pots05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308238530 (ATXN2)
05017 Spinocerebellar ataxia
308238530 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
308238530 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308238530 (ATXN2)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
308238530 (ATXN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
308238530
NCBI-ProteinID:
XP_080506715
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All DBs
Position
13:11795457..11894653
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AA seq
1162 aa
AA seq
DB search
MSLKPQQQQQPSAAASVRKPGGGGLLTSPAAPPSSPSVSSSAPASSSSAAAASAGSGRPG
LGRGRNNNKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKC
DLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRVASETDAFTDS
AISAKVNGEHKEKDLEPWDAGELTTSEELEALENDVSNGWDPNDMFRYNEENYGVVSTYD
SSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQR
NSSEREGHGINTRENKYIPPGQRNREVMSWGSGRQNSPRMGQPGSGSMPSRSTSHTSDFN
PNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPP
SHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHTPPS
EAVAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIP
TEAVAMPVPAASPTPASPASNRAVTPSMEAKDSRLQDQRQNSPAGNKENMKPNETSPSFS
KVENKGISPVVSEHRKQIDDLKKFKNDFRLQPSSTSESVDQLLNKNREGEKSRDLIKDKI
EPNAKDSFLENNSSNCTSCSSKPNSPSISPSILSNTEHRRGPEVTSQGVQTSSPGCKQEK
DDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTP
VYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQEQHHQS
TMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVLQGSA
RMMAPAAHAQPGLVSSSAAQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYA
HPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLAGPQQQSAIY
HAGLAPTPPSMTPASNTQSPQNSFPAAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSG
MVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSGEACVCRGRR
APQAFCSHRSNGRQGQRFKPCI
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccccagcagcagcagcagccgtccgcggccgccagtgtccgcaagccc
ggtggcggcggccttctcacgtcgcccgccgccccgccgtcctcgccctcggtctcgtcc
tcggccccggcttcctcctcctcggcggcggcggcgagcgcaggcagcgggcggcccggc
ctgggcagaggtcgaaacaataacaagggactgcctcagtctacgatttcttttgatgga
atctatgcaaatatgaggatggttcatatacttacatcagttgttggatcaaaatgtgaa
gtacaagtgaaaaacggaggcatatatgaaggagtttttaaaacatacagtcctaagtgt
gatttggtccttgatgctgcacatgagaaaagtacagaatccagttcagggccaaagcgt
gaagaaataatggagagtattttgtttaagtgttcagacttcgttgtggtacagtttaaa
gatatggactccagttatgcaagaagagttgcttcagaaacagatgcttttactgactca
gctatcagtgctaaagtgaacggtgaacacaaagagaaggacctggagccctgggatgca
ggggagctcactaccagtgaggagctggaagctttggaaaatgacgtctctaatggatgg
gatcccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtctacatatgat
agcagtttatcttcatatacggtgcccttagaaagggataattcagaagaatttttaaaa
cgagaagcaagagcaaaccaattagcagaagaaattgaatcaagtgcccagtacaaagcc
cgggtagccctggaaaatgatgataggagcgaagaagaaaaatacacagcagttcagaga
aattccagtgaacgtgagggtcacggcataaacactagggaaaataaatatattcctcct
ggacaaagaaatagagaagtcatgtcctggggaagtgggcgacaaaattcaccgcggatg
ggccagcctggatcgggctccatgccatcaagatccacttctcacacatcagatttcaat
ccgaattctggttcagaccaaagagtagttaatggaggtgttccctggccatcgccttgc
ccatctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacct
cgggcagccacccctacacggccgccctccaggcccccctcgcggccatccagacccccg
tctcacccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtct
tcagaagggcctccaaggatgtccccaaaggcccagcgacaccctcgaaatcacagagtt
tctgctggaaggggttccatttccagtggactagaatttgtatcccacacgccaccgagt
gaagcagtggctcctccggcagcaaggaccagtccagcggggggcacgtggtcatctgtg
gtcagcggggttccaagattatcccccaaaactcacagacccaggtctcccagacagaac
agtattggaaatactcctagtggaccagttcttgcttctccccaagctggcattattccc
acggaagctgttgctatgcctgttccagctgcatctcccacgcctgccagtcctgcatct
aacagagctgtcaccccatctatggaggctaaggattccaggcttcaagatcagaggcag
aactctcctgcagggaataaggaaaacatgaagcccaatgagacatcacccagcttctca
aaagttgaaaataaaggtatatcaccagttgtttccgagcatagaaaacagattgatgac
ttaaagaaatttaagaatgattttaggttacagccaagttctacttctgaatctgtggat
caactgctaaacaaaaatagagagggagaaaaatcaagagatttgatcaaagacaaaatt
gaaccaaatgctaaggattctttccttgaaaataacagcagcaactgcaccagttgcagc
agcaagccgaacagccccagcatttccccctcaatcctcagtaacacggagcacaggagg
ggacctgaggtcacttcccaaggagttcagacttccagcccaggatgtaaacaagagaaa
gatgataaagaggagaaaaaagacgcagctgagcaagtgaggaaatcaacattgaatccc
aatgcaaaggaattcaaccctcgttctttttctcagccaaagccttctaccaccccaact
tcgcctcgtcctcaagcacaacctagcccttccatggtgggtcatcagcagccaactcca
gtttatactcagcctgtttgttttgcaccaaatatgatgtatccagtcccagtgagccca
ggcgtgcaacctttataccctatacctatgacacccatgccagtgaatcaagccaagaca
tatagagcaggtaaagtaccaaatatgccccaacaacggcaagagcagcatcatcagagc
accatgatgcaccccgcctcagcggcaggcccaccaattgtggccaccccaccagcttat
tccacacaatacgttgcctatagtcctcagcagtttccaaatcagcctcttgttcagcac
gtgccccattatcagtctcagcaccctcatgtctacagtcctgtactacagggcagtgcc
aggatgatggcaccagcagcacacgcccagccgggtctcgtatcttcctcagctgctcag
tacggggctcacgagcagacacatgcgatgtatgcatgtcccaaattaccatacaacaag
gagacaagcccttctttctactttgccatttccactggctcccttgctcagcagtatgcg
caccctaatgctaccctgcacccacatactccacatcctcagccttcagccacccccact
ggacagcagcaaagccaacatggtggaagtcaccctgcacccagtcccgtccagcaccat
cagcaccaggccgcccaggctctccacctggcgggtccacagcagcaatcagccatttac
cacgcggggctcgcgccaaccccgccgtccatgacacctgcttccaacacgcagtcgcca
cagaacagtttcccagcagcacagcagacggtcttcacaatccacccttcccacgtccag
ccggcgtacaccaacccgccccacatggcccacgtacctcaggctcatgtacagtcagga
atggttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacagccaccc
ggcggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcgacaaca
gcgcatttcccctatatgacgcacccttcaggtgaggcgtgtgtgtgcaggggccgccgg
gcaccccaagcattctgctcgcacaggtcgaatggcaggcagggccagcgcttcaaaccc
tgcatttga
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integrated database retrieval system
