Plecotus auritus (brown big-eared bat): 308238608
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Entry
308238608 CDS
T11911
Symbol
THOC5, AC0HY7_005441
Name
(RefSeq) THO complex subunit 5 isoform 1
KO
K13174
THO complex subunit 5
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03013
Nucleocytoplasmic transport
pots03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308238608 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
308238608 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308238608 (THOC5)
03041 Spliceosome [BR:
pots03041
]
308238608 (THOC5)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
308238608 (THOC5)
Spliceosome [BR:
pots03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
308238608 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
308238608
NCBI-ProteinID:
XP_080506917
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All DBs
Position
13:complement(27265095..27292508)
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AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAVEIEDRRILSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSVEEFYQEAPPDISKAEITR
GDPHQQTLARLDWELEQRKRLAEKYRESLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPHEESQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
HLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSSSHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCHYLFPAKVVSRLVKWVTIAHEDYVELHFTKDIV
EAGLAGDTNLYYMALVERGTAKLQAAVVLNPGYSAIPPVFQLCLNWKGEKTNSNDDNIRA
MESEVNVCYKELCGPRPGHQLLTNQLQRLCVLLDVYLETEIHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagagtcgagcaagaaacggaagcccaaagtgattcgaagtgatggagctcca
gcggaagggaagcggaatcgttctgacaccgagcaggaaggtaaatactacagtgaggag
gctgaggtggacctgcgggaccctggaagagactatgagctgtacaagtacacgtgccag
gagttgcagagactcatggccgagatccaggacctgaagagcaggggaggcaaagatgtg
gcagttgagattgaagatcgcaggatcctgagctgtgttcatttcatgactctaaagaag
ctcaaccgattagcccacatcaggttgaagaaaggacgagatcagacccatgaggccaag
cagaaagtagacgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaggagatcactaaatgtctggagtttaagtcaaagcatgaagaaattgacctggtc
agtgtagaggagttttatcaagaggctcctccagatatcagcaaggctgaaatcaccagg
ggagaccctcaccagcaaacgcttgcacgtctggattgggagctggagcagcggaaaagg
ttggcagagaagtaccgagagtccctctccaacaaggagaagatccttaaggagattgaa
gtgaagaaggaatacctgagcagcctccagcctcgcctgaacagcatcatgcaggcttcc
ctcccggtgcaagagtacctgttcatgcctttcgaccaggctcacaaacaatacgagaca
gccagacacctgccgccgcccctctatgtcctctttgtccaggccactgcgtatgggcag
gcctgtgataagacgttgtctgtggcgatcgaaggcagtgtggatgaagccaaggccctg
tttaaacctcacgaggaatcccaagatgacgagagcgactcggatgccgaggaggagcag
accacgaaacgccggcgacccacactgggagttcagttggatgacaaacgcaaggagatg
ctgaagaggcacccgctgtccgtcatgctggacctcaagtgcaaagatgacagtgtgctt
cacctgactttctactatctcatgaacctcaacatcatgacagtaaaagccaaagtgacg
actgccacggagcttatcacccccatcagtgcaggtgacttgctgtctcctgactcagtc
ctgagctgtttgtatcctggggatcatggaaagaaaactccgaatccagccaatcagtac
cagtttgataaagttggcatcctgactttgagagactacgtacttgatttaggacacccc
tacttgtgggtacagaagctgggcggcctccacttccctaaagagcagccccagcatacg
gtgattgctgaccactcgctgagctccagccacatggagaccaccatgaaactgctaaag
accagagtgcagtcccgcctggccctccacaaacagttcgcgtccctggaacatggcatt
gtacccgttactagcgattgccactacctcttccctgcaaaggtggtctctcgcctggtg
aagtgggtgacgattgcccatgaggattacgtggagctgcatttcaccaaagacattgtg
gaggcaggactggctggggacaccaatctctactacatggcactcgtagaaaggggcaca
gccaaactccaggcagctgtggtgctgaaccccggctactccgccatcccacccgttttc
cagctctgtctgaactggaaaggggagaaaaccaacagcaatgatgacaatattcgggcc
atggagagcgaggtcaatgtgtgctacaaggaactgtgtggaccccggcccggccatcag
ctcttgaccaaccagctgcagcgcctgtgcgtgctgctggacgtctacctggagaccgag
atccacgatgacagcgtggaggggcccaaggagtttccccaggagaagatgtgtctgcgg
cttttcaggggtcccagcaggatgaagccgtttaaatataaccatcctcaaggattcttc
agccaccgctga
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