KEGG   Plecotus auritus (brown big-eared bat): 308238889
Entry
308238889         CDS       T11911                                 
Symbol
TAF5L, AC0HY7_005722
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pots  Plecotus auritus (brown big-eared bat)
Pathway
pots03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pots00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    308238889 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pots03021]
    308238889 (TAF5L)
   03036 Chromosome and associated proteins [BR:pots03036]
    308238889 (TAF5L)
Transcription machinery [BR:pots03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     308238889 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     308238889 (TAF5L)
Chromosome and associated proteins [BR:pots03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     308238889 (TAF5L)
    STAGA complex
     308238889 (TAF5L)
    TFTC complex
     308238889 (TAF5L)
    SAGA complex
     308238889 (TAF5L)
    SLIK complex
     308238889 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd TFIID_NTD2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st DSE1_N WDR90_beta-prop_4th Beta-prop_Aladin CFAP251_N Beta-prop_WDR41 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_NOL10_N PAC11 Beta-prop_VPS8 Beta-prop_SPT8 Tricorn_2nd Beta-prop_DCAF4 ASA1 Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_Vps41 PEP5_VPS11_N Beta-prop_IP5PC_F Nbas_N Ge1_WD40 PD40
Other DBs
NCBI-GeneID: 308238889
NCBI-ProteinID: XP_080507440
LinkDB
Position
14:complement(3840588..3861309)
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDTDGPLKQGLRLSQTPEEMAANLTVQSESGCANIVSA
SPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLHLVQNSPKSTAESFF
SRFHGMFLQNASQKDVVEQLQATQTIQDILSNLKLRAFLDNKYVVRLQEDSYHYLIRYLQ
SDNNAALCRVLTLHIHLDVQPVKRTDYQLYAGGGSSRGEGSGLEPADVPGPILQNEAALD
VLQESIRRVKEGPPSLTTICFYAFYNTEQLLNAAEISPDGKLLAAGFDNSCIKLWSLRSK
KLKAEPHQVDVSRIRLACDVLEEEEEEEEAAGTEMKTLRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGTFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KFLASAGEDQRLKLWDLASGSLYKELRGHTDNITSLAFSPDSSLVASAAMDNSVRIWDIR
SSFCSAAADGSSGELVGVYTGHMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgggtgcgcaccgagcagattcagatggccgtgtcctgctacctcaaacgccgg
cagtacgtggacaccgacggtcccctgaagcaaggcctgcgcctgtcccagacccccgag
gagatggcagccaacctcacagtccaatcagagtctggctgtgccaacatcgtgtccgcg
tccccgtgccaggcagagccccagcagtatgaagtgcagttcgggcggctgcggaatttc
ctcaccgattccgattcccagcatagccacgaagtgatgcctctcctgtaccctctcttt
gtctacctccacctccacctggtccagaacagccccaagagcacagcggagagcttcttc
agccgcttccacggcatgttcctgcagaacgccagccagaaggacgtggtcgagcagctg
caggccacgcagaccatccaggacatcctgtccaacctcaagctccgcgccttcctggac
aacaagtacgtggtccgcctccaggaagacagctaccactacctgatccgctacctccag
agcgacaacaacgccgccctgtgccgggtcctcacgctgcacatccacctggacgtgcag
cccgtcaagaggaccgactaccagctgtacgccggcggcggctcctcgcggggcgagggc
agcggcctggagcccgccgacgtgcccggcccgatcttgcagaacgaggccgccctggac
gtcctgcaggagagcatccggcgtgtcaaggagggcccgccctcgctcaccaccatctgc
ttctacgccttctacaacacggagcagctgctgaacgccgccgagatctcccccgacggc
aagctgctcgcggccggcttcgacaactcctgcatcaaactctggagcctccggtccaag
aagttgaaagccgagccccatcaggtggacgtgtcccgcatccgcctggcctgcgacgtt
ctggaagaggaggaggaggaggaggaggccgcgggcaccgagatgaagacgctgcgggga
cactgcgggcccgtgtacagcacgcgcttcctcgccgacagctcagggctgctctcctgc
tccgaggacatgtccatccggtactgggacctggggaccttcaccaacactgtgctgtac
cagggacacgcctacccggtgtgggacctggacatcagcccgtacagcctgtacttcgcc
agcgggtcccacgaccgcaccgcgcggctgtggtccttcgatcggacgtacccgctgcgg
atatacgcaggccacctggcggacgtggactgtgtcaggttccaccccaattccaactac
ctggccacgggctccaccgataagacggtccggctgtggagcgcccagcaggggaactcg
gtccggctgttcacgggccaccgcggccccgtgctgtcgctcgccttctctcccaacggg
aagttcctggcgtcggcgggcgaggaccagcggctgaagctgtgggacctggcctccggg
agcctctacaaggagctgcgcggccacacggacaacatcacgagcctcgccttcagcccc
gacagcagcctggtggcctcggcggccatggacaactcggtgcgcatctgggacatccgc
agcagcttctgcagcgcggccgccgacggctcctcgggcgagctggtgggcgtgtacacg
ggccacatgagcaacgtgctgagcgtgcagttcatggcctgcaacctcctcctggtgacg
ggaatcacgcaggaaaatcaggaacattga

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