Plecotus auritus (brown big-eared bat): 308240890
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Entry
308240890 CDS
T11911
Symbol
AC0HY7_007723
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03013
Nucleocytoplasmic transport
pots03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308240890 (AC0HY7_007723)
09122 Translation
03013 Nucleocytoplasmic transport
308240890 (AC0HY7_007723)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308240890 (AC0HY7_007723)
03041 Spliceosome [BR:
pots03041
]
308240890 (AC0HY7_007723)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
308240890 (AC0HY7_007723)
Spliceosome [BR:
pots03041
]
Complex C
Other components
EJC/TREX
308240890 (AC0HY7_007723)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
308240890 (AC0HY7_007723)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
308240890
NCBI-ProteinID:
XP_080510478
LinkDB
All DBs
Position
2:complement(<49083417..49092562)
Genome browser
AA seq
1563 aa
AA seq
DB search
MEAASVLVPVEWIKNWEKSGRGDFLDLCWLLSENKSHGSSTYRDFQRAVYELSYHVIKGN
LKPEQASNVLNDISEFREDMPSILADVFCILDIETTCLEEKSKRDCFTQLVLACLYFVSD
TILKERLDPETLESLGLIKQSQQFNQRSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITGDLILENIKSLIGCFNLDPSRVLDVILEVFECRPEHNDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQVNLIDLNDLYVHLLPAGNCIMDEHK
REMVEAKEIVRKLKMVVLSSEKIDKQEKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRTDVFNMFCYLGPHLSRDPILFAKVVRIGKSFMKEFQSDGSKQENKEKMEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDKVKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISGWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGRSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDYDLALPLCLIIAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHIPHDAAFFLSRPMYAHHISSKYDELKKSDKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHISKVWDDISPRFYATFWSLTMYDLAVPHTSYE
REVSKLKVQMKAIDDSQEMPPNKKKKEKERCSALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDALYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIFTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYIHIRNILIVLTKILPCYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGYSGQLKCRKSYMIPENDFHHKDPTPRNAVASV
QNGPGGGSSSSSIGSASKSHESSAEENDKSRERSQCGMKAVSKASSATLKGNSSNGNSGF
NSSKTIKENDKEKGKEKEKREKTPATTPEARVLSKDGKEKPKEERPNKDEKTRETKERTP
KTNKEKEKFKKEEKAKDEKFKTTVPNLESKLTQEKEIEKESFRERDIAKEIKSKENVKGG
EKRPVSGPLKSPVSRSDITEPEREQKRRKIDIHPSPSHTSTIKDSLIELKESSAKLYLNH
TPSPLIKSKERETDKKDLDKSRERSREREKKDEKDRKERKRHHSNNDREVLPDITKRRKE
ENGTMVSKHKSESPCDSPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSSGKKGIYR
PLS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcgtcggtgttggttccggtagagtggataaagaactgggagaaatcaggg
aggggcgactttttggacttatgttggcttcttagtgaaaataaaagccatggcagttcg
acttacagagatttccagcgagctgtctatgagttatcataccatgtcattaaaggaaat
ctgaagcccgaacaagcatctaatgttttaaatgacatcagcgaatttcgtgaggatatg
ccctccattcttgctgatgtcttttgcattttagatattgagacaacctgtttagaagag
aagagcaagagagactgttttacgcaattggtattagcgtgtttgtatttcgtttcagac
acgattctaaaggaacgcctggatccagaaacattggaatcattaggacttatcaaacaa
tcacagcaattcaatcaaaggtcagttaaaatcaagacaaaactcttttataagcagcaa
aagttcaatttgttaagagaagagaatgaagggtatgctaagctgattgctgaattgggg
caagatttatcgggaaatattactggtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctagatcccagtagagttttggatgtcattttagaagtgtttgaatgc
agaccagaacataatgacttttttatatctttattagaatcttatatgagtatgtgtgaa
ccgcaaacactttgtcatatacttgggttcaaattcaagttttaccaggagccaaatgga
gagactccttcatctttatacagagttgcagcagtgctcctacaagttaatcttattgat
ttaaatgatctttatgtacatcttcttccagctggtaattgcattatggatgaacataaa
cgagaaatggtggaagctaaggaaattgttagaaaacttaagatggttgtattgtcttct
gaaaaaattgataagcaagagaaggaaaaggaaaaagaggaggagaaagtagaaaagcca
cctgacaaccaaaaacttggtttgttagaagccttattaaagattggcgattggcagcat
gcacagaacattatggatcagatgcctccatactatgctgcttcacataagctaatagct
cttgctatttgcaagcttattcacataactattgagcctctctacagaagagttggtgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaataagagagcaccaaaacaa
gcagagagctttgaggatttgaggacagatgtcttcaatatgttctgttaccttggtccc
cacctttctcgtgatcccattttatttgcaaaagtggtgcgcataggcaaatcatttatg
aaggagtttcagtctgatggaagcaaacaagaaaataaagaaaaaatggaagttattctt
agctgtttacttagcattactgaccaggtactacttccatctctttctctgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccagtggaagaatgaaacttacaatagtcacccacttttagtaaaa
gttaaagctcaaacaatagacaaagttaaatatatcatgaaacgtctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaaattgagccacagcaatccaactattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggaaagaatgaaacatgatgacacaaccatttcaggctggcttcag
agtcttgctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
ctgcaatatgtggctaatcagctaaaagcaggcagaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaaattaccgaggaaatgacaatggagcaacta
gaggccatgactggtggagagcaactaaaagctgagggaggttattttggccagatcaga
aacactaaaaaatcctcccagagattaaaggatgcactattggactatgatcttgctctt
cccctttgtttgattatagctcagcagaggaatggggtgatctttcaggaaggtggagag
aaacatttgaaacttgtgggaaagctctatgatcagtgtcatgatacccttgtacagttt
ggtggatttttagcatctaatctaagcacagaagattatataaagagagtaccttcaatt
gatgtgctctgtaatgaatttcatataccccatgatgcagcatttttcttgtctagacca
atgtatgcacaccatatttcatccaaatatgacgaacttaaaaaatcagacaaaggaagt
aaacagcaacataaagtccacaagtatattacatcatgtgaaatggtgatggcccctgtc
catgaagcagtagtctcattacacatttccaaagtctgggatgacatcagccctcgattc
tatgccacattctggtcattgacaatgtatgaccttgcagttccgcacaccagctatgaa
cgggaagtcagtaaacttaaagtccagatgaaagcaattgatgacagtcaagaaatgcct
ccaaataaaaagaaaaaagagaaggaacgctgtagtgctcttcaggacaagcttcttgaa
gaagaaaagaaacaaatggaacatgtacagcgagttctacagagactgaaattggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttttacagctg
tgtatattccctcgatgtattttttcagcaattgatgctctttactgtgctcgttttgtt
gaattggtacatcagcagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataattttcacagttgcaagctgtactgaaaacgaagccagtcgatatggg
agatttctttgctgcatgttagagactgtgaccaggtggcacagtgatagagccacatat
gaaaaggaatgtggaaattatccaggattccttactatattacgggcaactggattcgat
ggtggaaataaagctgatcaactagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaactaaggcatcagtacattgccttgaaacaggtgaatatattcacatt
aggaatatcttgattgtgctaacaaaaatacttccttgttaccctaaagttttaaatctg
ggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaagagaaaaggcct
gatctatatgcattagctatgggctactctgggcagttgaaatgtaggaagtcctacatg
atacctgaaaatgattttcatcacaaagaccccactccgaggaatgcagttgccagtgta
caaaatgggcctggtggtgggtcttcttcatcttccataggaagtgcatctaaatctcat
gaaagcagtgctgaagagaatgataaatcaagggagagatctcagtgtggcatgaaagct
gtaagtaaagcttctagtgccacactgaaaggcaattcaagcaatggcaatagtggcttt
aatagcagcaaaaccattaaagaaaatgacaaagagaaagggaaagaaaaagagaaaaga
gaaaagactccagctactactccagaggccagggtacttagtaaagatggtaaagaaaaa
ccaaaggaagaacggccaaataaagatgaaaaaacaagagagacaaaagaaagaacacct
aagactaacaaagagaaagaaaaattcaagaaggaagaaaaagctaaagatgagaaattc
aagaccactgtccccaacctagaatcaaaattgactcaagaaaaggaaatagagaaggag
tcattcagagaaagagatatagcaaaggaaataaaatcaaaagaaaatgttaaaggagga
gaaaaaagaccagtttctgggcccttgaagtcacctgtttcccgatcagatattactgag
cctgaaagggaacaaaaacgccgtaaaattgatatacacccttctccatcacatacctca
acaataaaggacagtctcatcgaactcaaggagtcttcagcaaagctctaccttaatcat
actccttcaccactaatcaagagtaaggagagagaaacagacaagaaagatttggacaag
tcaagggaaagatccagagaaagagagaaaaaagatgaaaaggacagaaaagaacggaaa
aggcatcactcaaacaatgaccgggaagtgctaccagacataaccaagaggcgaaaagaa
gaaaacggaacaatggtttcaaaacacaaaagtgaaagtccatgtgattctccttatcca
aatgagaaagacaaggaaaaaaataagtcaaaatcttcaggcaaagaaaaaggcagtgat
tcatttaaatctgaaaagatggataaaatctcctccagtggcaaaaagggtatatacaga
cccctaagttga
DBGET
integrated database retrieval system
