Plecotus auritus (brown big-eared bat): 308243561
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Entry
308243561 CDS
T11911
Symbol
COL2A1, AC0HY7_010394
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots04151
PI3K-Akt signaling pathway
pots04510
Focal adhesion
pots04512
ECM-receptor interaction
pots04518
Integrin signaling
pots04974
Protein digestion and absorption
pots05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
308243561 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308243561 (COL2A1)
04518 Integrin signaling
308243561 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308243561 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
308243561 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
308243561 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pots00536
]
308243561 (COL2A1)
Glycosaminoglycan binding proteins [BR:
pots00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
308243561 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
308243561
NCBI-ProteinID:
XP_080515288
LinkDB
All DBs
Position
3:178319763..178350286
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AA seq
1488 aa
AA seq
DB search
MMRLGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGQRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGRQPGPKGQKGEPGDIKDIVGPK
GPPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNF
AAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPM
GPRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAK
GEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAVGARGNDGQPGPAGPPGPV
GPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAK
GSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQ
GAPGPAGEEGKRGARGEPGGAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLA
GPKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQP
GVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPSGERGEQGAP
GPSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGAR
GLPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGISGPKGDRGDVGEKGPEGAP
GKDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPP
GADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFP
GAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGAPGEKGEP
GDDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPP
GPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPLGAPGAPGPPGSPGPA
GPTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGETGEAGERGLKGHRGFTGLQ
GLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGSNGIPGPIGPPGPRGRSGETGPA
GPPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPMQYMRADQAAGNLRQHDAEVDATL
KSLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMET
GETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLR
LLSTEGSQNITYHCKNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCT
KHTGKWGKTMIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccagaaggctggcagctgtgtgcaggatgggcagagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtcctctgcgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccactgccagtggtcggcaa
ccaggaccaaagggacagaaaggagaacctggagacatcaaggatattgtaggacccaaa
ggaccccctgggcctcagggacctgccggtgaacaaggacccagaggtgatcgtggcgac
aaaggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccctgga
aatcctggccccccgggcccccctggcccccctggtccccctggccttggtggaaacttt
gccgcccagatggctggaggatttgatgagaaggctggtggcgcccagatgggagtaatg
caaggaccaatgggccccatgggaccgcgaggacctccaggccccgctggtgctcccgga
cctcaaggatttcaaggcaaccctggtgaacctggggaacccggcgtctcaggtcccatg
ggtccccgtggtcctccaggcccccctggaaagcctggtgatgatggtgaagctggaaag
cctggaaaatctggtgaaagaggccctcctggccctcagggtgctcgtggcttcccagga
accccaggacttcctggtgtcaaaggtcacagaggctacccaggcctggatggtgctaag
ggcgaagctggtgctccgggtgtgaagggcgagagtggctcccctggtgagaatggttct
ccgggccccatgggtccccgtggcctgcctggtgagagaggacggactggccctgcaggc
gccgtgggtgcccggggcaacgacggtcaaccaggccctgcagggcctccgggtcccgtg
ggtcctgctggcggtcctggcttccctggggctcccggtgccaagggtgaagctggtccc
actggtgctcgtggtcctgaaggcgctcaaggtcctcgcggtgaacctggcactcctggg
tcccccgggccggctggtgcctctggcaaccccggaaccgatggaattcctggagccaaa
ggatctgctggtgctcctggcattgctggtgctcccggcttccctgggccccggggtcct
cctggccctcaaggggcaactggtcctttgggcccgaaaggtcagacgggtgagcctggt
attgctggcttcaaaggcgaacaaggccccaagggagaaactggccctgcaggcccccag
ggagcccctggtcccgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggt
gctgggcccatcggcccccctggagaaagaggtgctcctggcaaccgtggtttccctggt
caagatggtctggccggtcccaagggagcccctggagagcgagggcccagtggccttgct
ggacccaagggagccaacggtgaccctggccgtcccggagagcctggccttcctggagct
cggggtctcactggccgtcctggtgatgctggtcctcaaggcaaagttggtccttctgga
gcccctggtgaagacggtcgccctgggcctccaggtcctcagggggctcgtgggcagcct
ggtgtcatgggtttccctggccccaaaggtgccaatggcgagcctgggaaagctggtgag
aaaggactgcccggtgctcctggtctgagaggtcttcctggcaaggatggtgagacaggt
gctgcaggcccccctggacccgctggaccttcaggtgaacgaggcgagcagggtgctccg
ggaccatctggcttccagggacttcctggccctcccggtcccccaggtgaaggtggaaaa
ccaggtgaccagggcgttcctggcgaagctggagcccccggcctcgtgggtcccagaggt
gaacgaggtttcccaggtgaacgtggctctcctggtgcccagggcctccagggagcccgt
ggcctccccggcactcccggcactgatggtcccaaaggtgcatctggcccggctggcccc
cctggggctcagggccctccaggtcttcagggcatgcccggtgagaggggagcagctggt
atttctgggcccaagggagacaggggtgatgttggcgagaaaggcccagagggagcccct
gggaaggatggtggacgaggtctgacaggtcccattggcccccctggtccggctggtgcc
aacggtgagaagggagaagttggcccccctggtcctgcgggaaccgctggtgctcgaggt
gccccgggtgaacgtggagagaccggacctcccggacccgctggattcgctggtcctcct
ggtgctgatggccagccaggcgccaagggtgagcaaggagaggctggccagaaaggtgac
gctggtgccccagggccgcagggcccctctggagctcctgggcctcagggtcctactggt
gtgactggccctaaaggagcccgaggtgctcaaggccccccgggagccaccggattcccc
ggagctgctggccgtgtcggacccccaggctccaacggcaaccctggaccccctggtccc
cctggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggcccccccggc
cgagctggtgaccccggcctccaaggtcctgccggagcccctggcgagaagggagagcct
ggagatgacggtccctctggtcccgacggtcctccaggtccccagggtctggctggtcag
aggggcatcgttggtctgcccggacagcgtggtgagagaggattccctggcctgcccggc
ccatcgggcgagcctggcaagcagggagctcctggtgcatctggagaccgaggtccccca
ggccccgtgggtccccctggcctgactggtcctgctggtgaacccggacgagagggaagc
cctggcgctgacggcccccctggcagagatggtgcagctggagtcaagggagatcgtggt
gaaactggtcccctgggtgctcctggagcccctgggccccctggctctcccggccccgct
ggcccaactggcaagcagggagaccgaggagaagcgggtgcacaaggccccatgggcccc
gcaggacccgctggagcccgtggaatcccaggccctcaaggcccccgaggtgacaaagga
gagactggagaggctggcgagaggggactgaagggacaccgtggcttcactggtctgcag
ggtcttcccggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtcct
tctggccctagaggtcctcctggccccgtcggtccctctggcaaagatggctctaatgga
attcctggccccattggacctcctggtccccgtggacgttctggcgaaacaggccccgct
ggtcctcctggaaatcctggaccccctggccctccaggtccccctggccctggcattgac
atgtcagccttcgccggcttaggcgggagagagaaaggccccgaccccatgcagtacatg
cgggccgatcaggcagccggcaatctgaggcagcatgacgcggaggtggatgccacgctc
aagtccctcaacaaccagattgagagcatccgcagccccgagggctcccgcaagaacccc
gctcgcacctgccgggacctgaaactctgccacccagaatggaagagcggagactactgg
atcgaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagact
ggcgagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagc
aagagcaaagacaagaaacatatctggtttggagaaaccatcaatggtggcttccatttc
agctatggtgatgacaacctggctcccaacactgccaacgtccagatgaccttcctgcgc
ctgctgtccactgaaggctcccagaacatcacttaccactgcaagaacagcattgcctac
ctggatgaagcagctggcaacctcaagaaggccctcctcatccagggttccaatgatgtg
gagatccgggctgagggcaacagcaggttcacgtatacggtcctgaaggatggctgcacg
aaacacaccggtaagtggggcaagactatgatcgagtaccggtcacagaagacctcacgc
ctccccatcattgacattgcacccatggacataggagggcccgagcaggaatttggtgtg
gacatagggcctgtctgcttcttgtaa
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