Plecotus auritus (brown big-eared bat): 308245136
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Entry
308245136 CDS
T11911
Symbol
EXOSC8, AC0HY7_011969
Name
(RefSeq) exosome complex component RRP43 isoform 6
KO
K12586
exosome complex component RRP43
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
308245136 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308245136 (EXOSC8)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
308245136 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
SUKH-3
Motif
Other DBs
NCBI-GeneID:
308245136
NCBI-ProteinID:
XP_080518011
LinkDB
All DBs
Position
3:complement(111021562..111029544)
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AA seq
294 aa
AA seq
DB search
MLRFITSHIFLICFRTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSVSTADGSALV
KLGNTAVICGIKAEFAAPPPDAPDKGYVVHSCRVFLSVPNVDLPPLCSSRFRSGPPGEEA
QVASQFIADVIENSQIILKEDLCISPGKLAWVLYCDLICLDYDGNILDACTFALLAALKN
VQLPEVTINEETALAEVNLKKKRYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTL
TVVMDEEGKLCCLHKPGGSGLTGAKLQDCLSRAVTRHKEVKKLMDEVIKSMKAK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgttaagattcattacttcacatatatttttaatatgtttcagaactgtggaacctctg
gagtattacaggagatttttgaaagagaactgccgtcctgatggaagagaacttggtgaa
ttcagaaccacaactgttaacataggttctgttagtactgcagatggttctgctctagtg
aagctgggaaatactgcagtcatttgtggaattaaagcggaatttgcagcaccaccacca
gatgcccctgataaaggatatgttgttcatagttgcagagtgtttctttcagttcctaat
gtggatctaccacctctgtgttcgtcgagatttcggtctggacctcctggagaagaggcc
caagtagctagccagttcattgcagatgtcattgaaaattcacagataattctgaaagag
gacttatgcatttctccagggaagcttgcttgggttctatactgtgatctcatttgcctt
gactatgatggaaatattttggatgcctgtacatttgctttgttggcagctttaaaaaat
gtacagttgcctgaagttactataaatgaagaaactgctttagcagaagttaatttaaag
aagaaacgttatttgaacattagaactcatccagttgctacctcttttgcggtctttgat
gacactctgctcatagtggaccctactggagaggaggaacatctggcaactggaacccta
acagtagtaatggacgaagaaggcaagctatgttgtcttcacaaaccaggtggaagtggg
ctgactggagctaaacttcaggactgtctgagccgagcagttacaagacacaaagaagta
aaaaaactgatggatgaagtaattaagagtatgaaagccaaataa
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