Plecotus auritus (brown big-eared bat): 308245889
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Entry
308245889 CDS
T11911
Symbol
COL1A2, AC0HY7_012722
Name
(RefSeq) collagen alpha-2(I) chain isoform 2
KO
K06236
collagen type I alpha
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots04151
PI3K-Akt signaling pathway
pots04510
Focal adhesion
pots04512
ECM-receptor interaction
pots04518
Integrin signaling
pots04611
Platelet activation
pots04820
Cytoskeleton in muscle cells
pots04926
Relaxin signaling pathway
pots04933
AGE-RAGE signaling pathway in diabetic complications
pots04974
Protein digestion and absorption
pots05146
Amoebiasis
pots05165
Human papillomavirus infection
pots05205
Proteoglycans in cancer
pots05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
308245889 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
308245889 (COL1A2)
04518 Integrin signaling
308245889 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
308245889 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
308245889 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
308245889 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
308245889 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
308245889 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
308245889 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
308245889 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
308245889 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
308245889 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
308245889 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pots00536
]
308245889 (COL1A2)
Glycosaminoglycan binding proteins [BR:
pots00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
308245889 (COL1A2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
308245889
NCBI-ProteinID:
XP_080519941
LinkDB
All DBs
Position
4:165185912..165221463
Genome browser
AA seq
1363 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQCKCLQLGPNGDRGPRGERGPPGPPGRDGDDGIPGPAG
PPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGAPGPQGFQGPAGEPGEP
GQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHN
GLDGLKGQPGAPGIKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPV
GPAGPLGSAGPPGFPGAPGPKGEIGPVGNPGPSGPAGPRGEVGLPGLSGPVGPPGNPGAN
GLAGAKGAAGLPGVAGAPGLPGPRGIPGPPGAAGAAGPRGLVGEPGPAGSKGETGNKGEP
GSAGAQGPPGPSGEEGKRGTAGEAGPAGAPGPAGLRGNPGSRGLPGADGRAGVMGPAGPR
GATGPAGARGPHGDAGRPGEPGLMGPRGFPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPA
GARGEPGNIGFPGPKGPTGDAGKPGEKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGK
GEQGPAGPPGFQGLPGPAGTAGEAGKPGERGLPGEFGLPGPAGPRGERGPPGESGAVGPS
GPIGSRGPSGPPGPDGNKGEPGSVGAPGSAGANGPGGLPGERGAAGIPGGKGDKGEPGLR
GEMGSTGRDGARGAPGAMGAPGPSGASGDRGEAGAAGTAGPAGPRGSPGERGEVGPAGPN
GFAGPAGAAGQPGAKGERGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGTRGDGGPP
GMTGFPGAAGRTGPPGPSGITGPPGPPGASGKEGIRGPRGDQGPVGRTGETGASGPPGFV
GEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEPGPLGIAGPP
GARGPPGAVGNPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGDRGYPGNAGPVGTVGAP
GPHGPVGPTGKHGNRGEPGPAGAVGPTGAAGPRGPSGAQGIRGDKGEPGEKGPRGLPGLK
GHNGLQGLPGLAGHHGDQGAPGTVGPAGPRGPAGPSGPPGKDGRNGHPGVVGPAGIRGTQ
GSQGPAGPPGPPGPPGPPGISGGGYDFGFDGDFYRADQPRSPPSLRPKDYEVDATLKSLN
NQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETC
IRAQPENIPVKNGYRSSKAKKHVWLGETINGGTQFEYNVEGVTTKEMATQLAFMRLLANH
ASQNITYHCKNSIAYMDDETGNLKKSVILQGSNDVELVSEGNSRFTYTVLVDGCSKKTNE
WGKTIIEYKTNKPSRLPFLDIAILDIGGADQEISLDIGPVCFK
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca
acatgccaatgtaagtgccttcagcttggcccaaatggagatagaggaccacgtggagaa
aggggtccaccaggcccaccaggcagagatggtgatgatggtatcccaggccctgctggc
ccacctggtcctcctggcccccctggtcttggcgggaactttgctgcccagtacgatgga
aaaggagttggacttggccctggaccaatgggtctgatgggacccagaggccctcctgga
gcagctggagcccctggccctcaaggtttccaaggacctgctggtgagcctggtgaacct
ggtcaaactggtcctgcaggttctcgtggtccagctggccctcctggcaaggctggtgag
gacggtcaccctggaaaacccggccgacctggcgagagaggagttgttgggccacagggt
gctcgtggtttccctgggactcctggacttcctggcttcaagggcattaggggacacaat
ggtctggatggattgaagggacaacccggtgctccaggtattaagggtgaacctggtgcc
cctggtgaaaatggaactcctggtcaagcaggagcccgtgggttgcctggtgagcgagga
cgagttggtgcccctggcccagctggtgcccgtggaagtgatggcagtgtgggtcctgtg
ggtcctgctggtccccttgggtctgctggccctccaggcttcccaggtgcccctggcccc
aagggtgaaattggacctgttggtaaccctggtccttctggtcctgccggtccccgtggt
gaagtgggtcttccaggtctctctggccctgttggacctcctggaaaccctggagccaat
ggcctggctggtgctaagggtgctgctggcctgcctggcgttgctggggcccctggcctc
cctggaccccgaggtatccctggccctcctggtgctgctggtgccgctggtcccagagga
ctcgttggtgagcctggtccagctggttccaaaggagagactggtaacaagggtgagccc
ggttctgctggagctcaaggtcctcctggtcccagtggggaagaaggaaagagaggcacc
gctggtgaagctggccccgctggcgccccaggacctgctgggctgagaggaaatcctggc
tctcgtggtcttcctggagctgatggcagagctggtgtcatgggccctgctggtccacgt
ggtgcaactggtcctgctggtgctcgaggtcctcatggagatgctggtcgccctggagaa
cctggtctcatgggaccccgaggttttcccggttcccctggaaatgttggcccagctggt
aaagaaggtcccgtgggtctccctgggattgacggcaggcccggacccattggcccagct
ggagcaagaggagagcctggcaacatcggattccctgggcccaaaggccccactggtgat
gctggcaaacctggagaaaaaggtcatgctggtcttgctggtgcccggggtgccccaggt
cctgatggaaacaatggtgctcaggggcctcctggaccacagggtgtccaaggtggaaaa
ggtgaacagggtcccgctggtcctccaggcttccagggactgccaggccctgcaggtaca
gctggtgaagctggcaaaccaggagaaaggggtctccctggtgaatttggtctccctggt
cctgctggtccaagaggggagcgtggtcccccaggtgaaagtggtgctgttggtccttct
ggtcctattggaagccgaggtccttctggacccccagggcctgatggaaacaagggtgaa
cctggatccgttggtgctcctggcagtgctggtgctaatggtcctggtggactccctgga
gagaggggtgctgctggcatccctggaggcaagggagacaagggtgaacctggcctcaga
ggtgaaatgggtagcacaggcagagatggtgctcggggcgctcctggtgccatgggtgcc
cctggtccttctggagcctctggtgaccggggtgaagctggtgctgctggtactgctggt
cccgctggtcctcgtggtagccctggtgaacgtggtgaagttggtcccgctggtcccaat
ggatttgctggtcctgccggtgccgctggtcaacctggtgctaaaggagagagaggaacc
aaagggcccaagggtgaaaatggtattgttggtcccacaggccctgtaggagctgctgga
ccatctggtcccaatggccccccaggtcctgctggaactcgtggtgatggtggtccccct
ggcatgactggtttccctggtgctgctggacgtactggtcctcctggacccagtggtatc
actggccctcctggtccccctggtgcttctggtaaagaaggaatccgtgggcctcgtggt
gaccaaggtccagttggccgaactggagaaacaggcgcaagtgggcctcctggctttgtt
ggtgaaaagggtccttctggagagcctggtactgctggacctcctggcaccccaggtcct
cagggtcttctgggtgctcctggtattctgggtctcccaggctctagaggtgaacgtggt
ctcccaggtgtttccggatctgtgggtgaacctggtcctctcggcattgccggtccacct
ggggcccgtggtccccctggtgctgtgggtaatcctggagttaatggtgctcctggtgaa
gccggccgtgatggcaaccctgggagtgatggtcccccaggccgtgatggtcaacctgga
cacaagggagatcgtggttaccctggcaacgctggtcctgttggcactgtgggtgcacct
ggtcctcatggccctgtgggtcccactggaaaacatggaaaccgtggtgaacctggtcct
gctggtgctgttggtcccaccggtgccgctggtccaagaggtcctagtggcgcacaaggt
attcgaggtgataagggagagcctggtgagaaggggcccagaggtcttcctggcttaaag
ggacacaatggattgcaaggtcttcctggtcttgctggtcatcatggtgatcaaggtgct
cctggcactgtgggtcctgctggccctaggggccctgctggtccttctggccctcctggc
aaagatggtcgcaatggacatcctggtgtggtcggacctgctggcattcgtggcactcag
ggtagccaaggtcctgctggtcctcctggtccccctggccctcccgggcctcctggcata
agtggtggtggttatgactttggttttgatggagacttctacagggctgaccagcctcgt
tcaccaccttctctcagacccaaggattatgaagttgatgccactctgaaatctctcaac
aaccagattgaaacccttcttactcccgaaggctctaggaagaacccagcacgcacatgc
cgtgacttgagactcagccacccagagtggagcagtggttactactggattgacccaaac
caaggatgtactatggatgctatcaaagtatactgcgatttctctactggtgaaacctgc
atccgggctcaacctgagaacatcccagtcaagaacgggtacagaagttccaaggccaag
aagcacgtctggttaggagaaactatcaacggtggaacccagtttgaatacaatgttgaa
ggagtgactaccaaggaaatggctacccaacttgccttcatgcgcctgctggccaaccat
gcctctcaaaacatcacctaccactgcaagaacagcattgcatacatggatgatgagact
ggcaacctgaagaagtctgtcattctgcaaggctccaatgatgttgaacttgtttctgag
ggcaacagcaggttcacttacactgttcttgtagacggctgctctaaaaagacaaatgaa
tggggaaagacaatcattgaatacaaaacaaataagccatctcgcctgcctttccttgat
attgcaattttggacatcggtggtgctgaccaagaaatcagtttggacattggcccagtc
tgtttcaaatag
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