Plecotus auritus (brown big-eared bat): 308248805
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Entry
308248805 CDS
T11911
Symbol
AC0HY7_015638
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03018
RNA degradation
pots03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308248805 (AC0HY7_015638)
09123 Folding, sorting and degradation
03018 RNA degradation
308248805 (AC0HY7_015638)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308248805 (AC0HY7_015638)
03041 Spliceosome [BR:
pots03041
]
308248805 (AC0HY7_015638)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308248805 (AC0HY7_015638)
mRNA degradation factors
5'-3' decay
Lsm complex
308248805 (AC0HY7_015638)
Spliceosome [BR:
pots03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
308248805 (AC0HY7_015638)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
308248805
NCBI-ProteinID:
XP_080525234
LinkDB
All DBs
Position
5:complement(<44911222..44911708)
Genome browser
AA seq
139 aa
AA seq
DB search
MLPWSLLRTAQNHPMLVELKNGETHNGHLVSCDNWMNNILREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPHEIIDMVKEEVVAKGRGCGSLQQQKQQRGRGMGGAGRGVFGGRGRGGI
SGTGRGQPEKKPGRQACKQ
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgctcccgtggtcactgctgaggacggcccagaatcaccccatgttagtggagcttaaa
aacggggagacgcacaatgggcacctggtaagctgtgacaactggatgaacaacatcctg
cgcgaggtgatatgcacctctagggatggggacaagttctggcggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatcccgcatgagatcattgacatggtcaaa
gaggaggtggtggccaagggtcgtggctgtggtagcctgcagcagcagaagcagcagaga
ggccgaggcatggggggtgctggacgaggtgtgtttggcggccgtggcagaggcgggatc
tcaggcactggcagaggtcagccagaaaagaagcccggcaggcaggcgtgcaaacagtga
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integrated database retrieval system
