Plecotus auritus (brown big-eared bat): 308248813
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Entry
308248813 CDS
T11911
Symbol
NCBP1, AC0HY7_015646
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03013
Nucleocytoplasmic transport
pots03015
mRNA surveillance pathway
pots03040
Spliceosome
pots05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308248813 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
308248813 (NCBP1)
03015 mRNA surveillance pathway
308248813 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308248813 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308248813 (NCBP1)
03041 Spliceosome [BR:
pots03041
]
308248813 (NCBP1)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
308248813 (NCBP1)
Spliceosome [BR:
pots03041
]
Common components
Common spliceosomal components
Cap binding complex
308248813 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
308248813
NCBI-ProteinID:
XP_080525247
LinkDB
All DBs
Position
5:158418069..158463369
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHRDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
IPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERNTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPDSPKPKFVKEVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATSDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFIRLFVWEILHSTIRKMNKHVLKIQKELD
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcgtcatcgggacgagaacgacgggggacaacctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggtgttttggaagctgat
attcctaactacaagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgacaatttatacaacattagttggattgctgaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgtcaacttaaagaatctttgaaagcaaacaat
tataatgaagctgtgtatttggttcgttttttatctgatctcgtgaattgtcacgtcatt
gcagccccatcaatggttgctatgtttgaaaattttgtaagcgtaactcaggaagaggat
gtacctcaggtgcgacgggattggtatgtgtatgcatttctgtcatctttgccctgggtt
ggaaaggaattgtatgagaagaaagatgcagagatggaccgcatctttgccaacactgaa
agctatcttaaaagacgccaaaagactcatgtgcccatgttacaagtgtggactgctgag
aaaccacatccacaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcattgcagcacaatttgcctccttttacaccacctcctcacactgaggattca
gtgtacccaatgccaagggtcatcttcagaatgtttgattacacggatgatcctgagggt
cctgtaatgccagggagtcattccgtggaaagatttgtaatagaagagaatcttcactgc
atcattaagtcccactggaaggaaagaaatacttgtgccgcacagctggtgagctatcca
gggaagaacaaaatccccttgaactaccatatagttgaggtgatctttgcagagctgttt
caacttccagcaccccctcacattgatgtgatgtacacaacacttctcattgaactgtgc
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatatatg
cgtttggacaccatgaatactacatgtgtagacaggtttattaattggttttcccatcat
ctaagtaacttccagttccgttggagctgggaagattggtcagactgtcttactcaagat
cctgatagtcccaaaccaaagtttgtaaaagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgttcctcctaccttctcagccctatgtcctgcaaac
ccaacctgcatttataaatatggagatgaaagtagcaattctcttcctggacattcggtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccagtgatgaaatcttcagcatt
ctgaaagatgtaccaaatcccaaccaggatgatgatgatgatgaaggattcagctttaac
ccattgaaaatagaggtttttgtgcagactctgctacatttggcagccaaatcgttcagc
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaagttacatgttctaagagttatgtttgaggtctggaggaaccatccacagatg
attgctgtactagtagacaagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaactatctcgtgactttattagattgtttgtttgggaaatc
ctgcactctacaattcgtaagatgaacaaacacgttctgaagatacagaaagagctggat
gaagctaaagaaaaactcgcaagacagcacaaacggagaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaagagcaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacaaaagaacctcttccttgtcatatttcagcgctttatcatgatc
ttgactgagcatttagtacgatgtgagacggacgggaccagcatattaacaccgtggtat
aagaactgtatagagaggctccaacagatcttcttacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgaattagaccctcatatcctcgct
gtgttccagcagttctgtgccctgcaggcctaa
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