Plecotus auritus (brown big-eared bat): 308248858
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Entry
308248858 CDS
T11911
Symbol
DDX18, AC0HY7_015691
Name
(RefSeq) ATP-dependent RNA helicase DDX18 isoform 1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pots Plecotus auritus (brown big-eared bat)
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pots03041
]
308248858 (DDX18)
03009 Ribosome biogenesis [BR:
pots03009
]
308248858 (DDX18)
Enzymes [BR:
pots01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
308248858 (DDX18)
Spliceosome [BR:
pots03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
308248858 (DDX18)
Ribosome biogenesis [BR:
pots03009
]
Eukaryotic type
90S particles
Helicases
308248858 (DDX18)
Pre-60S particles
308248858 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
308248858
NCBI-ProteinID:
XP_080525402
LinkDB
All DBs
Position
5:88211768..88230815
Genome browser
AA seq
670 aa
AA seq
DB search
MAHLPMKLLRRKIEKRNLKLRQRNLKLQGAWDVSLSETQDEDVSQETVASGKIKKSLKQS
MNVGLSEAPNGDTCKGTVKNVKVKKSPKKSTILANGEAVVHSPNSESKKKKKKKKRKMVD
DAGPDTKKAKTEDKVEPEEGAQAPEATENSVEEPGDGEEESEVPSLPLGLTGAFEDTSFA
SLSNLVNENTLRAIKEMGFTNMTEIQHKSVRPLLEGRDLLAAAKTGSGKTLAFLIPAVEL
IVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRAAEAQKLAN
GINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPTRRQT
MLFSATQTRRVEDLARISLKKEPLYVGVDDDKTNATVDGLEQGYVVCPSEKRFLLLFTFL
KKNRKKKLMVFFSSCMSVKYHYELLNYIDLPVLAIHGRQKQNRRTTTFFQFCNADTGILL
CTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELGFLRY
LKQSKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLKQIFN
VNNLNLPHVALSFGFKVPPFVDLNVNSNEGKLKKRGGGGGFGYQKPKKVEKSKIFKHISK
KSSDGRQFSH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctcacctgccgatgaagctcctgcgcaggaagatcgagaagcggaacctcaagttg
cggcagagaaacctaaagctgcagggggcctgggatgtgagcctatcagaaactcaagat
gaagatgtgtctcaagaaacagtagcaagtggaaaaattaaaaaatccctaaaacagtct
atgaatgtaggcttgtcagaagccccaaatggagatacatgtaaaggaacagtgaaaaat
gtaaaagttaaaaaatctcccaagaaatctaccatattagccaacggggaagcagtagtg
cactctcccaattcagaatctaagaagaagaagaaaaagaaaaagagaaaaatggtggat
gatgctgggcctgataccaaaaaagcaaaaacagaagacaaagtggaaccagaggaaggt
gcccaggcccctgaagcaaccgaaaacagtgtggaggagccgggcgatggagaagaggag
agcgaggtgcccagcctgcccctgggactgacaggagcttttgaggacacttcatttgct
tctctctctaatcttgtcaatgagaacactctgcgggcaataaaagaaatgggctttaca
aacatgactgaaatccagcataaaagtgtcagaccacttctggaaggcagggatcttctg
gcagctgcaaaaactggcagtggcaaaaccctggcctttctcatccctgcagttgaactc
attgttaaattaaagtttatgcccaggaatggaacaggagttcttattctgtcccctact
agggaactggccatgcagactttcggtgttcttaaagagctgatgacacaccacgttcac
acatacgggttgataatgggcggcagcaacagggctgctgaagcacagaagcttgctaat
gggatcaacatcattgtggccacaccaggccgtctcctggaccatatgcagaatactcca
gggtttatgtataaaaatctgcagtgtctggttattgatgaggctgatcgtatcttggat
gttgggtttgaagaggaattaaagcaaattattaaacttctgccaacacgcagacagacc
atgctcttttctgccacacaaactcgaagagttgaagacctggcaaggatttctctgaaa
aaggagccattgtatgttggtgtcgatgatgataaaactaacgcaacagtggatggtctt
gagcagggatatgttgtttgtccttctgaaaaaagattcctcctgctcttcacattcctt
aagaagaaccggaagaagaaactcatggtcttcttctcatcttgtatgtccgtgaaatac
cactatgagttgctgaactacattgatttgcctgtcttggccattcatggaaggcagaag
caaaataggcgtacaaccacattcttccaattctgcaatgcagatacggggatattgttg
tgcacggacgtggcagctagagggctggacattcctgaagtcgactggattgttcagtat
gaccctccagatgaccccaaggaatacattcatcgagtgggaagaactgccaggggccta
aacggaagggggcatgccttgctcattttgcgtcctgaggaattgggtttccttcgttac
ttgaagcaatccaaggttccattaagtgaatttgagttttcctggtccaagatttctgac
attcagtctcagcttgaaaaattgattgaaaagaactacttccttcataagtcagcccag
gaagcatataagtcgtacattcgagcatatgattcccattctctgaaacaaatctttaat
gttaataacttaaatttgcctcacgttgctctgtcatttggcttcaaggtgcctcctttt
gttgatctgaacgtgaacagcaatgaaggcaagctgaagaagagaggaggcggcggtgga
ttcggctaccagaagcccaagaaagtggagaagtccaaaatctttaagcacattagcaag
aagtcttccgacggcaggcagttctctcactga
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