Plecotus auritus (brown big-eared bat): 308249026
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Entry
308249026 CDS
T11911
Symbol
NUP188, AC0HY7_015859
Name
(RefSeq) nucleoporin NUP188 isoform 1
KO
K14311
nuclear pore complex protein Nup188
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03013
Nucleocytoplasmic transport
pots05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
308249026 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
308249026 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308249026 (NUP188)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
308249026 (NUP188)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
TRS130_4HB
Motif
Other DBs
NCBI-GeneID:
308249026
NCBI-ProteinID:
XP_080525744
LinkDB
All DBs
Position
5:181056312..181101128
Genome browser
AA seq
1749 aa
AA seq
DB search
MAAAAGELCVRSSRELWTILLGRSALRELNQIEAELNKHWQRLLEGLSYYKPPSPNSAEK
VKANKDVPSPLKELGLRISKFLGLDEEQSVQLLQCYLQEDYRGTRDLLKMVLQDERQSQA
LILKIADYYYEERMCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVTKYRQQFEEL
YRTEAPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLVLTKLFK
EQGFGSRQTNRHLVDETMDPFVDRIGYFSALILVEGMDIESLLKCALDDRRELHQFAQDG
LICQEMDRLMLTFGDISHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLSSGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVISHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFMAHQVSNMSQMISAEGMSA
GGYGNLLMNSEQPQGEYGVTIAFLRLITTLVKGQLGSTQSQGLVPCIMFVLKEMLPSYHK
WRYNSHGVREQIGCLILELIHAILNLCHETDHSGHTPSLQSLCICSLAYTEAGQTVVNIM
GIGVDTIDMVMAAQPRSDGAEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSNVVSPLEQAL
TQHGAHGNNLIAVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGNDAAAIRDAF
LTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKEFSLGVWSCLHA
VLELIDSQQQDRYWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGTL
SPPSETSEPSILETCALIMKIICLEIYYVVKGSLDRSLKDTLKKFSSEQRFAYWSGYVKS
LAGHTADTEGSSCTSWVEYQMLVSAWRMLLIIATSHAEILHLTDSAVRRQLFLDVLDGTK
ALLLVPASVNCLRLGSMMCTLLLILLRQWKRELSPGDEILAPLTEILEGVLHADRQLMEK
TKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSAMED
KDSMETDDCSRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLFTTLE
VSLRLKQNLHFTEAALHLLLTLARTQQGAAAVAGAGITQSICLPLLSVYQLSTNGTVQTP
STSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTVQ
SLACLEEADHTVGFILQLSSFMKEWHFHLPQLLRDVQVNLGYLCQACTSLLHSRKMLQHY
LQNKNGDGVPSAVAPRVQRPPTAAPAVPSSSSKQPTADTEASEQRALHVVQYGLLKILSR
TLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVALNM
LGELDKKKEPLTQAVGLSTQAEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHSRDK
QRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGILLSPQGKSTSLSKASPESQEPLIQLV
QAFVRHVQR
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgccggcgagctgtgtgtgaggagcagtagagaactgtggacaattctg
cttggaaggtccgctctgagagaactgaatcagattgaagcagaactgaataaacattgg
cagcggctattagaaggactttcatactataaacctcccagtccaaattcagctgaaaaa
gtgaaagctaataaagatgtaccttcaccactgaaggaactgggtttacgaatcagcaag
tttttgggtcttgacgaagaacagagtgtgcagttactccagtgttaccttcaagaggat
tacagaggtactcgggacttactaaagatggtactgcaagatgagaggcagagccaggcc
ttaatcctgaagattgcagattattactatgaagaaagaatgtgtattcttcgttgtgtc
ttacaccttctcacttatttccaagatgaaagacatccctatagggttgaatatgcagac
tgtgttgataaactggagaaggagctagttacaaaatatagacaacagtttgaagagctt
tatagaactgaagcaccaacatgggagacacatggaaacctcatgactgagcgtcaggtg
tctcgctggtttgtccaatgccttcgggaacagtccatgctgctagaaattatcttcctt
tattatgcatactttgagatggcacctagtgacctattggtgttaaccaagctgtttaaa
gagcaaggatttggtagtaggcagaccaacaggcacctggtggatgagaccatggatcct
tttgtggatcggattggctacttcagtgccctcatcctggtggaaggcatggatattgag
tcgttgctcaagtgtgctttggatgacagaagagaactgcaccagtttgcccaggacggg
cttatttgccaggagatggaccgtttgatgttgacctttggggacatttcacatcatgcc
ccagtgcttttggcctgggctctcctccgccacaccctgaatccagaagagacaagcagt
gttgtccgaaagataggtggcacagccatccaactgaatgtatttcagtacttgacccga
ctacttcgctctctgtccagtgggggaaatgattgcaccaccagcaccgcatgcatgtgt
gtctatggactcctttctttcgtgctgacctcgctggagctacacacgctgggcaatcag
caggatataattgacacagcatgtgaagtcttggcagacccttctcttccagaactgttc
tggggaacagagccaacctctggtcttggaatcattctggatagtgtctgtggaatgttt
ccccatctcctctccccactcctacagttgctgcgggccctcgtatcagggaagtctact
gccaaaaaggtatatagtttcttggataaaatgtctttctacaatgagctttataagcat
aagccccatgatgtgatctcccatgaagatggaactctctggcggaggcaaacacccaaa
ctcctttacccacttgggggtcagaccaaccttcgcatacctcaaggcaccgtgggccaa
gtaatgctggacgatagggcttacctggtacgctgggaatactcatatagcagctggacc
ctctttacctgtgagattgaaatgctgcttcatgttgtttccactgcagatgtgattcag
cactgccagcgggtcaaacccatcattgatctggtccataaggtcatcagtacagatctg
tcgatagcagactgtctcctgcccatcacctcccgcatctacatgctgctgcagcggtta
acgacagtcatctccccccctgtggatgtcattgcttcttgtgtcaattgtttgaccgtt
ttggctgcccggaaccccgcaaaggtctggactgatcttcgtcacacaggctttttacca
ttcatggcccaccaggtctccaacatgagtcagatgattagtgcggaggggatgagtgct
ggagggtacggaaacctcttgatgaatagtgaacagccccagggcgagtatggggtcact
attgcctttctccggttgatcaccactcttgtcaagggacagcttggtagtacccagagc
caaggactggtgccctgcatcatgttcgtgctgaaggagatgcttcccagctaccacaag
tggcgctacaactcccacggagtgagagagcagattggttgcctgatcctggagctgatc
cacgcgatactgaacctgtgccatgagacagaccacagcggccacacccccagcctgcag
tccctctgcatctgtagcctggcctatacagaagcaggacagacagttgtcaatatcatg
ggcatcggcgtggacaccatcgacatggtgatggctgctcagccccgcagtgatggggca
gagggccaggggcagggccagctgctgatcaagacagtgaaactggcattctccgtcacc
aacaatgtgattcggctgaaacctccttctaatgtggtgtcccctctggaacaggctctc
acacaacatggtgcccatgggaacaatctcattgctgttcttgccaaatacatctaccac
aaacatgacccagctttgccacgtctggccatccagctgctgaaacgtctggccacggtg
gccccgatgtcagtgtatgcctgcttgggcaatgatgcggctgccattcgcgacgctttc
ctgacacgattgcagagcaagattgaggacatgcgcatcaaagtcatgatcctggaattc
ctcacggttgcagtagagactcagccaggcctcattgaactgtttctgaatctggaggtg
aaggatggcagtgatggctccaaggagttcagccttggggtgtggagctgtctccatgcg
gtcctggagctgattgactcccagcagcaggatcgctactggtgcccgcccctgctgcac
cgtgcagccatcgcctttctgcatgccctgtggcaggaccggcgggacagtgccatgctg
gttctcaggaccaaacccaagttttgggagaatttgacaagtccactgttcggaaccctt
tctcctccctcagaaacatctgagcccagcatcctggaaacctgtgccctaatcatgaag
ataatatgcttggagatatactatgtagttaagggctcactagaccgctcactaaaagat
acactcaagaagttttccagtgagcaacgctttgcctactggtcagggtatgtcaagtcc
ttggcgggtcacacagccgacacggagggcagcagctgcacctcctgggtcgagtatcag
atgctggtctccgcctggaggatgcttctcatcattgccaccagtcacgcagagatactg
cacctgaccgactctgcagtgcgtcgccagctctttcttgatgtgcttgatgggaccaaa
gcgttgctcctggtcccagcctcagtgaactgcctccgcctcggctccatgatgtgcacg
ctgctgctgatcctcctgcggcagtggaagagagagttaagtcctggggatgagattctt
gcacccttgacagagatcctggagggagtgctgcatgcagaccggcagctcatggagaag
accaaggccaaggtgttctcagcattcatcactgtgctgcagatgaaggagatgagagtg
agtgacatcccccagtactctcagctagtgcttaacgtctgtgaaaccctccaagaagag
gtgattgcgctctttgaccagacccgccacagtctggcatcgggcagcgccatggaggac
aaggacagcatggagactgatgactgctctcggccccggcacaaggaccagcgtgatggg
gtgtgtgtcctgggcctgcacctggccaaggagctgtgtgaggtagatgaggatggtgac
tcatggctgcaggtgacccgcaggcttcccatcctgccaacgctctttaccaccctggag
gtgagccttcgcctgaagcagaacctgcatttcaccgaggcagctttgcacctgctcctc
accctggctcgcacccagcagggagccgcagcagtggctggagctggcatcacccagagc
atctgtttgcccctcctgagtgtgtaccagctcagcaccaacgggacagtgcagacaccc
agcacctctcggaaatccctcgatgccccctcttggccaggggtctatcgcctatccatg
tctttgatggaacggctcctcaaaaccctgcgctacaacttcttgaccgaggctctggac
ttcgtgggtgttcaccaggagcggaccttacaatgcctcaacgcggtgaggacggtgcag
agtctggcgtgcttggaggaggcagaccacacggtgggcttcattctgcagctctccagc
ttcatgaaggagtggcatttccacctgcctcagctcctgcgagatgtgcaggtcaacctg
ggttacctgtgccaggcctgcacctccctcctgcacagccggaagatgctgcagcactac
ctgcagaacaaaaatggggatggtgtcccctcagctgttgctccccgagttcagcggcca
cccacagctgcccctgctgtcccctcctcctcctccaagcagcccactgctgacacagag
gcttcggagcagcgagccttacacgtggtccagtatggcctcctcaagatcctcagcagg
accttggcggccctgcgccacttcaccccggacgtctgccagatcctgttggatcagtcc
ctggaccttgctgaatacaacttcctgtttgccctgagcttcaccactcccacctttgac
tctgaagtggccccctcttttggaacccttctggccacagtgaatgtggccctaaacatg
ctcggagagctggataagaaaaaggagcccctcactcaggctgtggggctcagcacacag
gcagaagggaccagaacactgaagtccctcctgatgtttaccatggagaactgcttctac
ctgctcatctcccaggcgatgcgttaccttagggacccagctgtgcactcccgggacaaa
cagcggatgaaacaggagctcagctcagagttgagcacgctgctctccagcctctcgcgc
tacttccgcaggggagcccccagctccccagctgctggcatcctcctctcgcctcagggc
aagtccacctctctctccaaggccagccccgagagtcaggagcctctgatccagctagtg
caggcctttgtccggcacgtgcaaagatag
DBGET
integrated database retrieval system
