Plecotus auritus (brown big-eared bat): 308251632
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Entry
308251632 CDS
T11911
Symbol
LSM6, AC0HY7_018465
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6 isoform 1
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03018
RNA degradation
pots03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308251632 (LSM6)
09123 Folding, sorting and degradation
03018 RNA degradation
308251632 (LSM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308251632 (LSM6)
03041 Spliceosome [BR:
pots03041
]
308251632 (LSM6)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
308251632 (LSM6)
mRNA degradation factors
5'-3' decay
Lsm complex
308251632 (LSM6)
Spliceosome [BR:
pots03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
308251632 (LSM6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
308251632
NCBI-ProteinID:
XP_080531507
LinkDB
All DBs
Position
6:55925374..55938260
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AA seq
80 aa
AA seq
DB search
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY
GDAFIRGNNVLYISTQKRRM
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgagtctacggaagcaaactcccagcgacttcttaaagcaaatcattggacgaccagtg
gtggtaaaactgaattctggagtggattatcgaggagtcctggcttgcctggatggctac
atgaatatagccttggagcagacggaagaatatgtaaatggacaactgaagaataagtat
ggggatgcatttatccgaggaaacaacgtgttatacataagcacacagaagagaaggatg
tga
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