Plecotus auritus (brown big-eared bat): 308254192
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Entry
308254192 CDS
T11911
Symbol
TRIM50, AC0HY7_021025
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
pots Plecotus auritus (brown big-eared bat)
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pots04121
]
308254192 (TRIM50)
Ubiquitin system [BR:
pots04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
308254192 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-Nse
TRIM_CC
Prok-RING_4
U-box
zf-ANAPC11
Ninein_long_CC
Baculo_IE-1
Trimer_CC
SSNA1
DUF7575
Motif
Other DBs
NCBI-GeneID:
308254192
NCBI-ProteinID:
XP_080536255
LinkDB
All DBs
Position
7:91470404..91479179
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AA seq
487 aa
AA seq
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MARLVSMTELEDRLQCPICLEVFKEPLMLQCGHSYCKGCLLSLLCHLDSELRCPVCRQEV
DGSSSPPNLSLGRVIEALGLPRDPEPKICAHHRNPLSLFCEKDQELICGLCGLLGSHQHH
RVTPVSTVYSRMKEELATLISDLKQEQKKVDEHIGKLVNNKTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGVEGHTRGLVASLDMQLEQAHSTRERLVQAKYMLEQFGNENHHDF
IRKYHSVASRAELQPARPLESTFNPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
TTAHPLLELSKGNTVVQCGLLAQRCASQPERFDYSTCVLASRGFSCGRHYWEVVVGIKSD
WRLGVIKGTASRKGKLSKSPEHGMWLIGLKEGRVYEAFGCPRVPLPVAGHPHRIGVYLHY
EQGELTFFDADRPDDLRPLYTFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPSHLS
SPQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggctggtgagcatgacggagctggaggaccgccttcagtgccccatctgcctc
gaggtcttcaaggagcccctaatgctgcagtgcggccactcctactgcaaaggctgcttg
ctgtccctgctctgccacctggactccgagctgcgttgccctgtgtgccggcaggaggtg
gacggcagcagctccccgcctaacctctccctggggcgggtgatcgaagccctgggactc
ccgcgggacccggagcctaagatctgcgcgcaccaccggaacccactcagcctcttctgc
gagaaggaccaggagctcatctgcggcctctgcggcctgctgggctcccaccagcaccac
cgggtcacgccggtctccaccgtctacagtcgcatgaaggaggagcttgcaaccctcatc
tctgacctgaagcaggagcagaagaaggtggatgagcatattggcaaactggtgaacaat
aagacccggattgttaatgaatctgatgtcttcagctgggtgatccgccgtgagttccag
gagttgcaccacctagtggatgaggagaaggcccgctgcctggaaggggtggaaggtcac
acccgtggcctcgtagcctccctggacatgcagctggagcaggcccacagcacacgggag
cggctggtccaagccaagtatatgctggagcagtttggtaatgagaatcaccatgacttc
atccggaagtaccactccgtggcctccagagcagagctccagccggcccgacctttggaa
agcacgttcaaccccatctccttcaaaccaggcctccaccaggctgacatcaagctgact
gtgtggaaaaggctcttccgcaaggttctgccagccccggagtctctcaagctggatccc
accacagcccacccactcctggaactctccaagggcaacacagtggtgcagtgtgggctc
ctggcccagcggtgcgccagccaacctgagcgctttgactatagcacttgtgtcctggcc
agccggggcttctcctgtggccgccactactgggaggtggtggtgggcatcaagagcgac
tggcgcctgggagtcatcaagggcacagccagtcgcaagggcaagctgagcaagtcccca
gagcatggcatgtggctcattggcttgaaggagggccgggtgtatgaggcttttggctgc
ccgcgggtgcctctgcccgtggccggacacccccaccgcattggtgtctatttgcattat
gagcagggagagctcaccttcttcgatgctgaccgcccagatgacctgcgaccactctac
acattccaggctgacttccagggcaagctctaccccatcctggacacatgctggcatgaa
aggggcagcaactcactgcccatggtgttgcccccacccagcgggcccagtcatctcagt
tctccacagcccaccaagctgtag
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integrated database retrieval system
