Plecotus auritus (brown big-eared bat): 308254371
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Entry
308254371 CDS
T11911
Symbol
THOC6, AC0HY7_021204
Name
(RefSeq) THO complex subunit 6 isoform 1
KO
K13175
THO complex subunit 6
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03013
Nucleocytoplasmic transport
pots03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
308254371 (THOC6)
09122 Translation
03013 Nucleocytoplasmic transport
308254371 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308254371 (THOC6)
03041 Spliceosome [BR:
pots03041
]
308254371 (THOC6)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
308254371 (THOC6)
Spliceosome [BR:
pots03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
308254371 (THOC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WDR55
WD40_Prp19
Beta-prop_NOL10_N
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_IP5PC_F
EIF3I
WDR54
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
TRM82_WD
ASA1
Beta-prop_EIPR1
DSE1_N
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
TIG
Motif
Other DBs
NCBI-GeneID:
308254371
NCBI-ProteinID:
XP_080536493
LinkDB
All DBs
Position
7:71880809..71884568
Genome browser
AA seq
367 aa
AA seq
DB search
MERAVPPTVPLGQMEVFQALQRLHMTIFSQSFSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPIVTFQAHDGPVYSMVSTDRHLFSAGDGEVKAWLWAEILKKGCKELWCRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRALRGHTDYIHCLALRERN
PEVLSGGEDGTVRLWDLRMAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMWAPQKHVTFYQDLILSAGQGPCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVGPARSCGGPGRPGVWVAQSPPSCLQVLTAAGNSCRVDVFTNLGY
RAFSLSF
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgtgccgcccacggtgcctctgggtcagatggaagtgtttcaggccctg
cagcgattgcacatgaccattttctcccagagtttttcaccctgcgggaagttcctggcg
gctggtaacaattatggacagatagccatcttcagcttgtctgctgctttgagctctgag
gccaaagaggaaagtaagaagcccatagtgaccttccaagcccatgatgggcctgtctac
agcatggtctccactgatcgacatctgttcagcgctggggacggggaggtgaaggcctgg
ctttgggcagagatcctcaagaagggctgtaaggagctatggtgtcgtcagcccccatac
aggaccagcctggaagtgcctgagatcaatgctttgcttctcgtccccaaggagaattcc
ctcatcttggcagggggagactgccagttgcatacgatggacctagagacggggaccttc
acgcgggccctccggggccacacagactacatccattgcctggccctgagggagcggaac
cctgaggtgctgtctggtggcgaggatggaactgtgcggctttgggatcttcgcatggcc
aaggaggtccagacaattgaggtctacaagcatgaggagtgctccaggccccacaatggg
cgctggatcggatgtttggcaactgactcagactggatggtttgtggaggaggcccagca
ctcaccctctggcacctccgatcctccacacccaccaccatcttccccatgtgggcacca
cagaagcatgtcaccttctaccaggacctgattctgtcagctggccagggcccctgcgtc
aaccagtggcaactgagtggggaacttaaggcccaggtgcctggttcctccccagggctg
ctcagcctcagtctcaaccagcagccagcagcacctgagtgcaaggtgggtcctgcacgg
agctgtgggggtcctgggaggccaggcgtgtgggtagctcagtcacccccctcttgcctc
caggttctgacagctgcaggcaacagttgccgggtggatgttttcaccaatctgggctat
cgggccttctccctgtccttctga
DBGET
integrated database retrieval system
