Plecotus auritus (brown big-eared bat): 308254891
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Entry
308254891 CDS
T11911
Symbol
RFC1, AC0HY7_021724
Name
(RefSeq) replication factor C subunit 1 isoform 1
KO
K10754
replication factor C subunit 1
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03030
DNA replication
pots03410
Base excision repair
pots03420
Nucleotide excision repair
pots03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
308254891 (RFC1)
03410 Base excision repair
308254891 (RFC1)
03420 Nucleotide excision repair
308254891 (RFC1)
03430 Mismatch repair
308254891 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pots03032
]
308254891 (RFC1)
03400 DNA repair and recombination proteins [BR:
pots03400
]
308254891 (RFC1)
DNA replication proteins [BR:
pots03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
308254891 (RFC1)
DNA repair and recombination proteins [BR:
pots03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
308254891 (RFC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_22
AAA_5
BRCT_2
RuvB_N
AAA_14
AAA_33
AAA_17
AAA_7
AAA_16
AAA_18
nSTAND3
AAA_30
Zeta_toxin
RNA_helicase
NTPase_1
AAA_28
NPHP3_N
Abhydrolase_8
AAA_19
Nexin_C
Motif
Other DBs
NCBI-GeneID:
308254891
NCBI-ProteinID:
XP_080537582
LinkDB
All DBs
Position
1:223518684..223588825
Genome browser
AA seq
1162 aa
AA seq
DB search
MFIHKMAAHIRGNTKKDIRKFFGVIPSGKKPASETVKKNEKTKSAEETSKAKKGIKEIKV
NSSCKDDDSKQKQPNRKKRIIYDSDSESEETIQVKNAKKQPEKLPLSKPGKILRQDPVTY
ISETDEEDDFMCKKAASKSKENGRSTNSYLGASNMKKNEENTKTKNKPLSPIKLTHTSVL
DYFGTASVQRSDKKMVASKRKEPSKNANDSRLNDEAIAKQLQLDEDAELERQLHEDEEFA
RTLAMLDEEPKNKKALKDPEERETFSSVHANLNKAEKHKCPYKVKTEQFLDERKNCSPKK
QIKCESSKGSQQHSKSSVHKRGETSPKASSKLTLLKKKEESSSKETEPTSLKRKEYAVEL
KGEAKSPKKIKSSPAKKESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCL
EGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGT
KIIDEDGLLDLIRTMPGKKSKYEIAVEAEMNKEKSKLQRTPPKNHQGKRKISPNKKESES
RKSQRTPKKDSSMTSVKKETSVFQRGRDFKEQVAEETNGDSWARNLADDSNENKVANLLW
VDKYKPTSLKTIIGQQGDQSCANKLLRWLQNWHKSPSEDRKHAAKFGKFAGKDDGSSFKA
ALLSGPPGVGKTTTASLVCQELGYSYVELNASDTRSKNSLKDIVAESLNNTSIKGFYSSG
AATSVSMKHALIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHY
CFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGSNQDIRQVLHNLSMWCARSK
ALTYDQAKADSQRAKKDIKLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQ
ENYIHVKPVAAGGDIKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPG
ELMRGYMTQFPTFPSWLGKHSSTGRHDRLVQDLALHMSLRTYSSKRTINMDYLSHIRDAL
VQPLTSQGVEGVQDVVALMDAYYLMKEDFENIMEMSSWGGKPSPFSKLDPKVKAAFTRAY
NKEAHLTPYSLQAVKAPRHSTGPALEPEHSEEFREDDSQSDEKEQDAVETDAMIKKKTKS
SNPSKSEKDKESRKGKGKGSKK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtttatacacaagatggctgctcacattagaggtaatactaaaaaggatattcggaaa
ttctttggggttataccaagtggaaagaaacctgcaagtgaaacagtaaagaagaatgag
aaaacaaagtctgctgaagaaacttcaaaagcaaagaaaggaataaaggaaatcaaggta
aatagttcttgtaaagatgatgactctaaacagaagcaaccaaacaggaaaaagaggatc
atctatgattcagattcagagtcagaggagacaatacaggtgaaaaatgccaaaaagcaa
ccagaaaaattgccattgtctaagcctggtaaaattctgcggcaggatcctgttacgtac
atttcagaaacagatgaagaagatgactttatgtgtaagaaggcagcttctaaatcaaaa
gagaatggaagatctacaaatagttatcttggagcatcaaacatgaaaaagaatgaagaa
aacactaagaccaagaataagcctttatcgccaataaaacttacccacacatcagtgctt
gattattttggaactgcaagtgtccaaagatcagataagaagatggtggcaagcaaaaga
aaagagccttcaaaaaatgcaaatgattccagattaaatgatgaagccattgccaaacaa
ttgcaacttgatgaagatgcagagctggagagacaactgcatgaagatgaagagtttgcc
agaacattagccatgttggatgaagaacctaagaacaaaaaggctttaaaggacccagaa
gagagagaaacgttttcatctgtccacgccaatttaaataaagcagaaaaacataaatgt
ccttataaagtaaaaacagaacaatttttggatgaaagaaagaactgcagtcctaagaag
caaattaaatgtgaaagttcaaaaggatctcagcaacattccaagtcttcagttcacaaa
agaggagaaacttctcctaaagctagttccaagctgacgcttttgaaaaaaaaggaagag
agttcttctaaagaaacagagcctacatccttgaaaagaaaagaatatgccgttgaattg
aaaggagaggcaaaaagtcctaagaaaatcaaaagttctcctgctaaaaaagagtctata
agtcctgaagattctgaaaagagacgcactaattatcaagcttatcgcagttacttaaat
cgagaaggtcccaaagctctgggctccaaagaaataccaaagggagctgaaaattgcttg
gaaggccttatatttgtaatcacaggagtgctggagtccattgaaagagatgaagccaag
tctctaattgaacgttatggaggaaaagtaactgggaacgtcagcaagaaaacaaactac
cttgtcatgggtcgtgatagcgggcagtccaagagtgacaaggcagcagctttggggaca
aaaattattgatgaggatggcctattggatctgattcgaactatgccaggcaagaagtct
aaatatgaaatagcagttgaagctgagatgaataaagaaaagtccaaattacaaagaaca
cccccaaaaaaccaccaaggaaaaagaaaaattagtccaaataagaaggaatcagaatcc
agaaagagccaacggactcccaaaaaggacagctctatgacgtcagtaaaaaaggaaaca
agtgtgtttcagagaggccgggacttcaaggagcaggtggccgaggagacaaatggtgac
agctgggctaggaatttggctgatgacagcaatgaaaataaggtggcaaatttgctctgg
gtggataaatacaagccaacctcactcaagaccataattggacagcaaggtgaccagagc
tgtgccaacaaactcctacgctggctccaaaactggcacaagagtccatccgaagatagg
aaacacgcagcaaagtttggtaaatttgccggcaaagatgatggctctagttttaaagcg
gcattgctctcaggccctccaggtgttggcaaaaccaccacggcctctctggtttgtcag
gaattgggatatagctatgtggagctgaatgcaagtgatactcggagtaagaacagttta
aaggatattgttgctgagtcactgaataataccagcatcaaaggcttttattcaagtgga
gcagccacttcagttagcatgaaacacgccctcatcatggatgaagtagacggcatggca
ggcaatgaggacaggggaggaattcaggaactaattggcctgataaaacatacaaaaatt
cccattatttgtatgtgcaatgatagaaatcatcctaagattcgctctttggttcattat
tgttttgatcttcgttttcaaagacctcgggttgaacagattaagggtgctatgatgtca
attgcatttaaagagggtttgaagattccccctccagctatgaatgaaataattttggga
tccaatcaagatatcagacaggttttacacaacctgagcatgtggtgtgcacgaagcaag
gcactaacctatgaccaggccaaggctgactctcagagagccaaaaaggacatcaaactg
ggcccatttgatgttgcccggaaggtgtttgcagctggagaggagactgctcatatgtcg
cttgtggacaaatccgatctcttttttcatgattattcaatagcgcccctctttgtccag
gagaactacatacacgtgaagcctgtagctgcggggggggacataaaaaagcacttgatg
cttttaagcagagcagcagatagcatatgtgatggtgacctagtggaccggcagatccgg
agtaagcaaaactggagtcttctgcccacacaggccatttatgccagtgttcttcctgga
gagttaatgagggggtacatgactcagttccccaccttcccgagctggctgggtaagcac
tcgtctacaggcagacacgatcgtcttgtgcaggatctagcattgcacatgagtctcaga
acttactccagcaaaaggactataaatatggattatctatcacatatacgggatgcactt
gtacagcccttgacctcacaaggggtagaaggagtacaggatgttgttgcccttatggat
gcctattatttgatgaaagaagactttgagaatatcatggagatgagcagctggggaggc
aagcctagtcccttctccaagctggatcccaaggtgaaggcagcctttacgagagcttac
aacaaggaagcccacctgactccgtactcgctgcaggcagtgaaggcccccaggcacagc
accggccccgcgctggagcctgagcacagtgaggagttccgggaggacgactctcagtct
gatgagaaggagcaagacgctgtggaaacggatgctatgatcaagaaaaagacaaaatct
tcaaatccttcgaaatcagaaaaagataaggagtccagaaaaggaaaaggaaaaggttca
aagaaatga
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integrated database retrieval system
