Plecotus auritus (brown big-eared bat): 308254973
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Entry
308254973 CDS
T11911
Symbol
SKIC3, AC0HY7_021806
Name
(RefSeq) superkiller complex protein 3 isoform 1
KO
K12600
superkiller protein 3
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
308254973 (SKIC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308254973 (SKIC3)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
308254973 (SKIC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_11
TPR_12
CFAP70_TPR_C
CFAP70_mid_TPR
ANAPC3
TPR_9
TPR_INTS8_3
CABIN1_N
Sel1
ARM_TT21_2nd
TTC22_N
Fis1_TPR_C
TPR_15
ARM_TT21_C
ARM_TT21_5th
TPR_30
TPR_20
Retrotran_gag_2
TPR_5
DUF7017
ANAPC5
TPR_6
BTAD
Motif
Other DBs
NCBI-GeneID:
308254973
NCBI-ProteinID:
XP_080537782
LinkDB
All DBs
Position
7:121368241..121442606
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNQINGKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQDKKHIEVARTWHKLIKIRQEAGADNQELHQLWRKLTQLLAESTEDQNNETQQ
LLLTAFENALDLSDKIPSEDHQELYRHFIQCLSKFPHETARLKKACEGMINIYPTVQYPL
EVLCLHLIESGILTDEGQQYCCRLVEMDSKSGPGLIGLGIKALQEKKYEDADRNLREGLK
ESPLCTTGWYHLAEAQVKMHRPMEAVLSCNQALKNIDNVGVSGGSLHQKNLCLRLKAEAL
IKLPDNESAEEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLKEASKIMEDVLSSYPDLA
EAHALEAFIHFTKKDYLQAEKCFHRALEKDAEVAEYHYQLGLTYWFMGEETRKDKTKALT
HFLKAARLDTYMGKAFCYLGHYYRDVAGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAVAHYQLIIK
TKEDYVPALKGLGECHLMMAKAALVDYLDGKAVEYIEKALEYFTWALQHRADVSCLWKLV
GDACTSLHAVSPSKVNVNVLGVLLGQKEGKQVLKKNELLHLGGRCYGHALKLMSTSNTWC
DLGINYYRQAQHLAETGSNMNDLKDLLEKSLHCLKKAVRLNSKSHLYWNALGVVSCYSGI
KNYALAQHCFIKSIQSEQINPVAWTNLGVLYLANENIEQAHEAFKTAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYRYNILQMN
AIPAAQVVLSKYIERIPNYAPALTMLSYLNEHLQLKKEAADALHRAILLLQNAEDQVNYQ
DAIRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSVLKEPTIESLQALCALGLAMQDVTL
SKAALNELLKHVKQKDNDYQRCLLTSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLS
RVVAQYAQRNAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEDEKNTALKTIQ
KATFLSPGDPAMWAGLMAACYADDKLALVNNTQPKRMDLYLALLSAVSASIKDKEFFESY
NESLEKWSLSQAVTGLVDTGRISEAEALCTKNLKSNPDQPAVILLLRQVQCKPLLESQKP
LPDAVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGSWSGKL
SSLLRLALLALEVCMANISNDHWPSLVQEATTEALKLCFCPLAILLQALLQFNRKMGARE
TRRLLERLVYQPGYPKSIVSTARWYLLRHLHAKNDGELIDVLVNNAKTHGDTRALDLNQK
LSS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaaggaagtgaagactgccctaaaaagtgctagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtatttattggtgttgccgcagccgagctagaacaacctgatcaggcccag
ggtgcctataagaaagcggctgaactagagccagaccaattactagcttggcaggggtta
gcaagcctgtatgagaaatgtaatcagataaatggtaaggatgacttacctggtgtttac
caaaagctcctggatctttatgaaagtgttgacaaacagaagtggtgtgatgtctgtaag
aaacttgtggatctgtattaccaagacaagaaacacatagaggtggctcgaacatggcac
aaattgataaagatacggcaagaagcaggtgcagacaaccaagagcttcatcagctgtgg
aggaaattgactcagttgctggctgagagcactgaggatcagaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcactggatttatcagataagattcctagtgaagat
catcaagaactttatagacatttcattcagtgtttatccaaatttcctcatgagactgct
aggttgaagaaggcctgtgaaggaatgataaacatctaccccactgtgcaatatccatta
gaagtgctttgtttgcatttaattgaatcaggaattcttactgatgagggacaacagtat
tgttgtagactagtggaaatggattcaaaaagtggtccaggcctcattggtttaggcatt
aaagcattacaagagaaaaagtatgaagatgctgataggaacttaagagaagggttaaaa
gaaagccctctctgcacaactggatggtatcatctggcagaagcccaagtcaaaatgcat
agacctatggaagctgttctttcatgcaatcaagctctgaagaacatagataatgttggt
gtgtctggtggcagtcttcatcagaagaatctttgtcttcgtttgaaagcagaggctttg
attaaactcccagataatgaatctgcagaggaagcaatttgtactcttgaccaggtttct
gatgcaaataatatcccaggacttttggttctcaaaagcttggcctatctgaacaaaggc
tcattaaaagaagcttcaaagattatggaagacgttctctcttcttaccctgacctagct
gaagctcatgccctggaggcctttattcattttaccaaaaaggactatctacaagcagaa
aaatgttttcacagagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacatattggttcatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cactttttaaaggctgccagactggatacatatatgggcaaagctttctgctatttaggt
cattattacagagatgtagcaggagataaaaacagagctcgtggatgttataggaaagct
tttgaattggatgacactgatgctgaatctggagctgcagctgttgacttaagtgtggag
cttgaagagatggaaactgccttagctattttaacaacagtaactcagaaggcaagtgct
ggaactgccaaatgggcctggcttaggcgaggactgtactatttgaaagctggtcaacat
tctcaagcagtggctgatttacaggcagcattaagggcagacccaaaggacttcaattgt
tgggaatcattaggagaggcatacttaagcagaggtggctatacaacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggtggcagca
atacagcaaatcctaggcaaatataaggaagctgtagctcactaccagctgatcattaaa
acgaaagaagattatgtacctgctttgaaaggtttgggtgaatgccatctcatgatggca
aaagcagcgctagtcgattaccttgatgggaaagctgtcgagtacatagaaaaagcactg
gaatattttacttgggctctgcagcatcgagctgatgtatcttgcctttggaagctagtt
ggggatgcttgtaccagtctgcatgctgtctcaccatctaaagtgaatgttaatgtttta
ggagtccttctaggccagaaagaaggaaaacaagtattaaagaaaaatgagctcctccat
cttggagggaggtgttacgggcatgcattaaaactgatgtctacatctaatacatggtgt
gatcttggaattaattattatcgtcaagcacaacatctagcagaaactggcagcaacatg
aatgatcttaaagacttgttggagaaatcattacattgtctgaaaaaggcagtgagactc
aacagtaaaagtcacttatactggaatgctcttggtgtggtttcatgttatagtggtatt
aaaaattatgcccttgctcagcattgcttcatcaaatcaatccagtcagagcaaattaat
cctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaacagctcagtcccttgatccatcttatttaatgtgctggattgga
caagctcttattgcagagacagttggaagttacgacaccatggatcttttcaggcacacc
acagaactcagtatgcataccgagggagcaatcggttatgcatactgggtctgtactaca
ttgcaagataaaagcaacagagaaacagaactgtaccggtacaacatcctccagatgaat
gctatcccagcagcacaggttgttttgagtaaatacatagaaagaattccaaactacgct
ccagctctcacaatgttgagttatttaaatgaacatctacagctgaaaaaggaagcagca
gatgcactccacagggcaattttgttgttacagaatgcagaagaccaagttaattatcag
gatgcaattagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaagagttagaagacatcataggttttgcactggct
ttatttatgaagggtctgtataaagagagcagtaaagcctatgagagagccttgtctatt
gttgaatcagagcaagacaaagcccatatcttgacagctctggcaataaccgagtataaa
caaggaaaaatggatgtagccaagacattgctgtttaaatgctctgtcttaaaggagcca
accatagagagccttcaagctctgtgtgccttgggattggcaatgcaggatgttacactg
tcaaaagcagcacttaacgagttactgaagcacgtcaaacagaaagacaatgattatcag
aggtgccttcttacttcagcgatttatgcgctgcaaggccgcagtgtggcagtgcagaga
caagcttctaaagctgttcacagtaacccagccgatcctgctctttggtctctgttgtcc
cgagtggttgctcagtatgcacaacgaaatgcaaagggaggcgctgtagcaggaaatgtg
gctcatattctggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcag
ttggctatgggaagcagttcagcagaagatgaaaaaaatactgcactaaagaccattcag
aaggcaactttcctttctccaggtgatcctgctatgtgggctgggctaatggcagcttgt
tatgctgatgataagctggctctagtgaacaacactcagccaaaaaggatggatttgtat
ttggcactgttatctgctgtttctgcttcaattaaagacaaagaattcttcgaaagttac
aacgaatctctggaaaagtggtctctctcccaagctgtcactggtctagtagacacagga
agaatatcagaagctgaagccctttgcacaaagaatttaaaaagtaaccctgaccagcca
gctgttatcttacttttgagacaagtgcagtgtaaaccactcctggaatcacaaaagcct
ctccctgatgctgtccttgaagagctgcaaaaaactgttatgtccaactcaacctctgtt
ccagcgtggcagtggttggcgcacatatatcagtctcaaggaatgatgggtgctgcagag
atgtgctataggaagagtctacaagtcgcatcccagcagggcagttggagtgggaagctg
tcgagtctgttgaggctagcactgctcgcattagaagtctgcatggccaacatttcaaat
gatcactggccatccttggttcaggaagctacaactgaggccttgaagctttgcttttgt
ccactggctatccttttacaagctttgttacagttcaaccgcaaaatgggggcaagagag
acacggcgacttttggagagactggtgtatcagcctggctatcccaaatctattgtatca
actgcacgttggtacctactgaggcacttacatgccaaaaatgatggcgagctcattgat
gtgctggtaaacaacgccaaaactcatggagatacaagagcactggatctgaatcaaaaa
ctgtcctcataa
DBGET
integrated database retrieval system
