Plecotus auritus (brown big-eared bat): 308257095
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Entry
308257095 CDS
T11911
Symbol
CPSF3, AC0HY7_023928
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308257095 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pots03021
]
308257095 (CPSF3)
03019 Messenger RNA biogenesis [BR:
pots03019
]
308257095 (CPSF3)
Transcription machinery [BR:
pots03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
308257095 (CPSF3)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
308257095 (CPSF3)
U7-dependent histone pre-mRNA processing factors
308257095 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
CopK
Motif
Other DBs
NCBI-GeneID:
308257095
NCBI-ProteinID:
XP_080542090
LinkDB
All DBs
Position
8:complement(173892681..173919411)
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPANDMYADTVTTVVLEVQSNPKIRKGAAQK
ASEKLEMHVYSKRLEVMLQDIFGEDCVSVKDGSMLSVTVDGKTANVNLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgatccctgcggaggagagcgaccagctgctgatccggcccctgggagctggg
caagaagtaggacgatcgtgtattatcctggagttcaaaggaagaaaaataatgttggac
tgtgggatccaccctggcctagaaggaatggacgctcttccttatatcgatttaattgac
ccagctgagattgacctcctactcattagtcacttccatttggatcactgtggagctctg
ccctggtttctacagaagacaagtttcaaaggaagaacattcatgactcatgctactaaa
gctatctacagatggcttctctcagattacgtcaaagtcagtaacatatcagcggacgac
atgctgtacactgagaccgacctggaagagagcatggacaaaatcgaaaccatcaacttc
catgaagtgaaggaggtcgcagggatcaagttctggtgttaccacgcgggccacgttctc
ggagctgccatgttcatgatcgagatcgcaggcgtgaagcttttgtatacaggtgacttc
tcacgacaagaagatagacacttaatggcagctgagattccaaatattaagcctgatatt
cttatcattgaatcgacatacgggacccacatccacgagaagcgggaagagcgagaagcg
cggttctgcaacacggtccacgacattgtgaacagaggcggccggggcctcatccctgtc
tttgctctcgggagggctcaggagctgctcctgattttagacgagtactggcagaatcac
ccggaactccacgacatcccgatatactacgcgtcgtctttggccaagaagtgcatggcc
gtgtaccagacgtacgtgaacgccatgaacgacaagatccgcaagcagatcaacatcaac
aaccccttcgtcttcaagcacatcagtaacctgaagagcatggaccattttgacgacatc
gggcccagcgtcgtgatggcctccccgggcatgatgcagagcggcctgtcccgggagctc
ttcgagagctggtgcacggacaagaggaacggcgtcatcatcgcaggctactgtgtggaa
ggcacgctggccaagcacatcatgtctgaacccgaagagatcacgaccatgtcaggacag
aagctgccgctgaaaatgtctgtcgattacatttctttctccgctcacacagattaccag
caaaccagcgaattcatccgcgctttgaaaccgcctcacgtgattttagtccatggagaa
cagaacgaaatggcccgattgaaagcagccctgattcgagaatacgaagataatgacgaa
gttcacatagaggttcataaccctcggaacacagaagcagtgaccttgaacttcagaggg
gaaaaactagccaaggtcatgggctttttagcagacaagaagccagaacaaggccagcgg
gtctcaggaatacttgttaagagaaactttaattatcacatactttctccttgcgacctc
tccaattataccgacctggccatgagcacggtgaagcagacccaagccattccctacacg
ggtccctttaatttgctctattaccagctacagaaactgacaggtgatgtagaagaatta
gaaattcaagaaaaacctgctttgaaagtgttcaaaaatattactgtaatacaggaacca
ggaatggtggtgttagaatggctcgctaaccctgccaacgacatgtatgcagacaccgtg
accaccgtggtcctcgaggtgcagtcaaacccgaaaatcaggaaaggtgcagcccagaag
gcgtctgagaagttggagatgcacgtgtacagcaagaggttggaggtcatgctccaggac
atattcggagaagactgcgtgagtgtgaaagatggctccatgctcagtgtcaccgtggac
gggaaaactgcgaacgtgaacttggagacccggaccgtcgagtgtgaggaaggaagcgaa
gatgacgagtctctccgagaaatggtggagctggccgcacagagactgtacgaggccctc
acgccggtgcactga
DBGET
integrated database retrieval system
