Plecotus auritus (brown big-eared bat): 308257980
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Entry
308257980 CDS
T11911
Symbol
CLP1, AC0HY7_024813
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform 1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pots Plecotus auritus (brown big-eared bat)
Pathway
pots03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pots00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
308257980 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pots03019
]
308257980 (CLP1)
Enzymes [BR:
pots01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
308257980 (CLP1)
Messenger RNA biogenesis [BR:
pots03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
308257980 (CLP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
308257980
NCBI-ProteinID:
XP_080544335
LinkDB
All DBs
Position
9:complement(135752239..135755429)
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AA seq
425 aa
AA seq
DB search
MGEETNDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggagaccaatgatgacaagaagccaacaactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaagcatctcagtcagttcagttggagctgctggctggc
atggcagaaatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gccaaggtagctgttttcacttggcacggctgctctgtacagttgagtggccgcaccgag
gtggcttatgtctccaaggacacccctatgttgctttacctcaacactcatacagctttg
gagcagatgcggaggcaggcggagaaggaagaagagcgaggcccacgggtgatggtagtg
ggccccactgatgtgggcaagtccacagtgtgccgcctgttgctcaactacgcagtgcgt
ttgggccgccgtcccacttacgtggagctggatgtgggccagggctctgtgtctatccct
ggtaccatgggggccctctacattgagcggccagcagatgttgaagaaggattctccatc
caggcccctctggtgtatcattttggctccaccactcctggcaccaacatcaagctttat
aataagattacatctcgtcttgcagatgtgttcaaccaaaggtgtgaagtgaaccgaagg
gcttctgtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggttaccag
gccctggtgcatgcagcttcagcctttgaggtagatgtggttgtggttctggatcaagaa
cgactttacaatgaactgaaacgggacttgcctcactttgtgcgtactgtgctgctccct
aaatcagggggtgtggttgagcgatccaaggatttccggcgggaatgtagggatgagcgt
atccgtgagtatttctatggattccggggctgtttttatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccactattccagactcctgtttgcct
ttgggcatgtctcaggaggacaatcagctgaagctagtacctgtcacccctggccgagat
atggtgcaccacctcctgagtgtcagcactgctgagggcacagaggagaacctttctgag
acgagtgtggctggtttcatcgtggtgaccagtgtggacctggagcatcaggtgtttacc
gttctctctccagccccccgtccactgcctaagaacttccttctcatcatggatatccgg
ttcatggatcttaaatag
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