Penicillium oxalicum: POX_a01391
Help
Entry
POX_a01391 CDS
T09521
Name
(RefSeq) General transcription and DNA repair factor IIH subunit tcf-29
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pou
Penicillium oxalicum
Pathway
pou03022
Basal transcription factors
pou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
POX_a01391
09124 Replication and repair
03420 Nucleotide excision repair
POX_a01391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pou03021
]
POX_a01391
03400 DNA repair and recombination proteins [BR:
pou03400
]
POX_a01391
Transcription machinery [BR:
pou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
POX_a01391
DNA repair and recombination proteins [BR:
pou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
POX_a01391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF5357
Motif
Other DBs
NCBI-GeneID:
74433724
NCBI-ProteinID:
XP_049974087
LinkDB
All DBs
Position
I:complement(4251181..4253181)
Genome browser
AA seq
641 aa
AA seq
DB search
MASPSGAASYKKKDGTLALSPDEQTLTWTPTAPGQPGVNITISGITNLKQTPATNPKVML
KIFVLAPNAPPNSEPDQYVFLFTAGPDLARAEADAIKNALSARMNAGKATTPAQTPAPGA
AGVGGLSAAMAIANAVSSASSSKNPWDDDNRLKGDVELQQSLLKADPSLQRMFMESIQTK
PDSLTSAQFMSQFWSTRLHLLRAHAIERAQTRGSYNVLSSLKPRVEENVTRLNISKEQIS
LIFSQHPLVKRVYDENVPKLSEQQFWSRFFQSRLFKKLRGERISETDATDAILDKYLREE
NAASTRESYVPHFMDLAGNEVHHSQRQGNRPDLDMRPSGADKVPIIRTLNSLSEKIMSNV
APADGDVTAPIGIDEETWQIMQLRDLQGDEEQTRVTLNIRDQNRFFSQTQEDEQTRAFAK
QDPNEILKTLQSEIAENLPLGGHAPLQKLVDPGDDEDEEMEDAPASQRPVGSSAALHDAF
AQILGAVREQREQMSERAASDTYGLSPSLYDRLTLTHATSTEFLNQFWQAFLSGNPERAG
EVQSLSESLIRAMDRIKAVANDAEAERQIEVDRRKNAAREYYEKTKRKPRLNLDDIEGGQ
KVVNQLLGPTLRALELASNRYRTTLEAEKAEAAREAAAPAI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcttctccgagcggagcagcctcatacaagaagaaagatggcactcttgctctttcg
ccagatgagcagacgctcacttggacaccaacagctccggggcagccgggggtgaatatt
acgatctcaggaatcaccaacctgaagcagaccccggcaacaaatcccaaagtcatgttg
aaaatatttgtcctcgccccaaatgcgccacctaacagtgagccagaccaatatgtgttt
ttgttcaccgcaggcccggacttggcccgcgcggaggccgacgccatcaagaatgcattg
agcgcacgaatgaatgcaggaaaggcaaccacccctgcgcagacgccagctcctggtgcg
gcgggcgtgggtggactatcggctgcaatggcaattgccaatgccgtatcctcagcgagt
tcatcgaagaacccgtgggatgatgacaaccggctgaagggggacgtggagctgcagcag
tctttgttgaaggccgacccttctctgcagcgaatgtttatggagtccattcaaactaaa
ccagacagtttgacctcggcgcagttcatgtctcaattctggtcgacccgactgcaccta
ttacgagcgcatgcgatcgagcgcgcgcagactcgcggctcgtacaatgtgctgtcatca
ctcaagcctcgtgtcgaagagaatgtgacacggctgaatatcagcaaagagcagatctcg
ctcatcttctctcagcatccgctggtcaagcgggtgtacgatgagaatgtcccgaaactg
agtgagcagcagttttggtcacggttcttccaaagtcggctgttcaagaagttgcgagga
gagcgtatatccgagactgatgcaacggatgcaatcttggacaagtatcttcgagaagag
aatgcagcttctactcgagaatcctacgttccgcactttatggatttggctggcaatgaa
gttcatcacagccaacgccaaggtaacagaccggacttggacatgcggccctcgggtgca
gacaaggtccctatcatccgaacgctgaacagtttgagtgagaagatcatgtccaacgtt
gccccggccgatggggatgtgactgcgcctatcggcatcgacgaggagacctggcagatc
atgcagcttagagatctgcagggcgatgaagagcagacccgtgtcacgttgaacattcgc
gatcaaaatcgcttcttttcccaaactcaggaggatgaacagacacgcgcatttgccaag
caggatccaaatgagattctgaagacactccagtcagaaatagcagagaatttgccactt
gggggccatgcgccgcttcagaagctggtggatccaggtgacgatgaagatgaagagatg
gaagacgcaccagccagtcagcgccccgtgggatcatcggctgctctccatgacgcattc
gcacagattctgggggctgtccgcgagcagcgcgagcagatgagcgaaagggctgcgtct
gatacttatgggctatctcctagtctttacgaccggttgactttgacccatgcgacatcc
accgaattcctgaatcaattctggcaagcctttctttctggtaatccggaacgagccggc
gaagtgcagtcgctctccgaatcattgattcgcgccatggaccgcatcaaagcggttgcc
aatgacgccgaagcggagcgtcaaatagaagttgatcggagaaagaatgcggcgcgcgag
tattacgaaaagacaaagcgcaagcctcggttaaacttggatgacattgagggtggccaa
aaggtggtcaatcagcttcttggtccgactttacgagccctggaactggcctccaatcgg
tatcgaaccactttggaagcagaaaaggcggaagcagcacgcgaggcagctgcgccagct
atttag
DBGET
integrated database retrieval system
