Penicillium oxalicum: POX_a01849
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Entry
POX_a01849 CDS
T09521
Name
(RefSeq) Pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
pou
Penicillium oxalicum
Pathway
pou03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pou00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
POX_a01849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pou03021
]
POX_a01849
03041 Spliceosome [BR:
pou03041
]
POX_a01849
03036 Chromosome and associated proteins [BR:
pou03036
]
POX_a01849
Transcription machinery [BR:
pou03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
POX_a01849
Spliceosome [BR:
pou03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
POX_a01849
Complex B
POX_a01849
Complex C
U2 SnRNP specific factors
POX_a01849
Chromosome and associated proteins [BR:
pou03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
POX_a01849
TFTC complex
POX_a01849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
74434178
NCBI-ProteinID:
XP_049974541
LinkDB
All DBs
Position
I:complement(5598383..5602461)
Genome browser
AA seq
1209 aa
AA seq
DB search
MATTSHMFMYSLTIQPPTAISQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLF
SQDVFGIIRSLAAFRLAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VVPGQYLAVDPKGRACLIASLEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALD
VGYENPVFAALEVDYSEADQDPTGQAYEDIEKVLVFYELDLGLNHVVRKWSDPVDRTANM
LFQVPGGADGPSGVLVCAEDNITYRHSNQDAFRVPIPRRTGATENPERKRTIVSGVMHKM
RGAFFFLLQTEDGDLFKLTLDMVEDENGQLTGEVRRLKIKYFDTVPVASSLLILKSGFLY
VASESGNHNFYQFEKLGDDDEETEFTSDNFSADPSVPYDPVFFRPRSAENLNLMESLNAL
NPMTDSKIANLTGEDAPQIYTVGGTGARSSFRTLKHGLEVSEIVESELRTVPSAVWTTKL
ARGDEYDAYIVLSFANGTLVLSIGEVVEEVSDTGFLSTAPTLAVQQLGEDSLIQVHPRGI
RHLMADRRVNEWPAPQHRSIVAAATNQRQVAVALSSGEIVYFEMDADGSLAEYDERRQMS
GTVTCLSLGEVPEGRTRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSALNIIA
MADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLSQVSVKGQTAV
LALSSRPWLGYSDVQTKSFMLTPLDYPGLEWGWNFSSEQCEEGMIGIQGKNLRIFSIDKL
DNNMLQESIPLAHTPRRFVKHPEQPLFYVIESDNNVLSSATQQSLIEDSKSRNGEAEVLP
PADFGYPRGQGHWASCIQIVDPVSSKQVIFSLDLEDNEAAVSIAAVPFASQDDETFLVVG
TAKDMTTDPPSSAGGFIHIYRFQEEGRELEFIHKTKVDDPPLALLAFQGRVLAGVGSLLR
LYDLGMKQLLRKCQAHVVPHTIVGLQTQGSRIIVSDVRDSVTYVVYKYQENVMIPFVDDT
VARWTTSTAMVDYETTAGGDKFGNIWLLRCPTKFSEEADEDGSGAHLLHERGYLQGTPNR
LDLMVHYYVQDIPTGIHKTQLVAGGRDILVWTGFQGTIGMFVPFVSREDVDFFQSLEMQL
ASQTPPLAGRDHLIYRGYYAPSKGVIDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI
SDMRTRVAY
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacatcgcacatgtttatgtactccctgacgattcagcctcccactgcgatc
tcacaggcaatcttgggccagtttgcaggcaccaaggagcagcaaatcgtcactgcttcg
ggatccaagctcaccattcaccgacctgacccgacccagggcaaggtcacaccccttttt
tcccaagatgtatttggtatcattcgctcactagcagcctttcgcctggctgggagcaat
aaagactacatcatcatcggatctgactcaggtcgtatcacgattattgaatatgtgcct
tctcaaaatcgctttaatcggatccacttggaaacatttggcaagtccggagtgcgtcga
gttgtccctggacagtacctagccgttgatccgaagggacgagcctgtctcatcgcctcg
ctggagaagaacaagctggtctacgttctcaaccgcaattcccaggcagagcttaccatc
tcttcgccccttgaggctcacaaaccccaaacgctggtatttgcgatgacggctcttgac
gtgggttacgaaaacccggttttcgctgctctggaagtggactactctgaagccgatcag
gatccaaccggacaagcgtacgaggatattgaaaaagttctcgttttctacgaactggat
cttggtctgaatcatgttgtccgtaagtggtccgatcctgtcgatcgcaccgcaaacatg
cttttccaggttcctggtggagccgatggaccgagtggtgtcctcgtatgcgctgaggac
aacatcacatatcgtcactcgaatcaggacgctttccgtgtcccgattcctcgacgtact
ggggcgactgaaaatccggagcgtaaacgcacaattgtgtccggtgtgatgcacaaaatg
agaggtgcttttttcttccttcttcaaaccgaggatggtgacctgttcaagctcacattg
gacatggttgaggatgagaacggccagctcacaggcgaagtgagaagattgaagatcaaa
tacttcgacactgtgccagtggcctctagtcttctaatcctcaagagtggattcctctat
gttgccagcgaatcaggaaaccacaacttttaccagttcgagaaacttggcgatgatgat
gaggaaaccgagttcacgagcgacaatttctcggctgatccatctgttccctacgacccc
gtcttcttccggccgcgatcagcagagaatctgaacttgatggaaagcctcaatgccctg
aacccaatgacagacagcaagattgccaacctcacgggtgaagatgcgccgcaaatctac
accgtgggtggcactggggctcgtagttcgtttagaacactgaagcacggtttggaagtc
tcagaaattgttgagtcggagctcaggactgtgccgtctgctgtgtggacaaccaagctt
gctcgtggtgatgaatacgatgcttatattgttctttcttttgcgaacggcacgcttgtt
cttagcatcggcgaggtggtggaggaagtttctgacactggcttcttgtccactgcacct
actcttgctgtgcaacaacttggtgaggattcgttgattcaggtgcatcctcgtgggatc
cgtcacttgatggctgatcgtcgtgtcaatgaatggcctgccccgcagcaccgttccatc
gtcgctgctgctaccaaccaacgccaggtcgctgtggcgctcagctcaggagagattgtc
tacttcgagatggacgcagacggctcgcttgcagagtatgatgagcgtcgtcaaatgtcc
ggcaccgtgacctgtctgagcttgggcgaggttcctgaaggacgcactcgcagttccttc
ttggcggtgggctgtgacgattccacagttcgcattcttagtctggatcctgactccaca
cttgagaacaagtctgttcaagccttgacatcagccccttcagcattgaacatcatcgcc
atggctgattcaagctctggtggcaccacactctatttgcacattggcctctattccgga
gtctaccttcgcactgtcttggatgaagttaccggtgaactgtcggatacacgcacgcgg
ttcctcggcgcgaagcctgtcaaattatcccaggtctctgtgaaagggcagactgccgtg
cttgccttgagttcgcgcccgtggctcggttattccgatgttcagaccaagagtttcatg
ctcacgccgctcgactaccctggtctcgaatggggttggaacttttcaagtgagcagtgt
gaggaaggtatgattggcatccaggggaaaaatctacgaattttctccattgacaaactc
gacaataacatgcttcaggagtcaattccattggcccacactcctcgtcgattcgtcaaa
catcccgagcagccactcttctacgtcattgagtctgacaacaatgtcctctcttcggcg
acacaacagagtctcatcgaggattcgaaatctcgtaacggtgaggccgaggtgctaccg
ccggcagattttggctaccctcgcggccagggacactgggcgtcttgtattcaaatcgtc
gatcccgtgtcgtccaagcaagtgatattttcgctggacttggaagacaatgaggctgcc
gtgagcattgcggcagtgccattcgctagccaggatgacgagacattcctggttgtcgga
acagccaaggatatgacaacagacccaccttcgtccgccggtggcttcattcacatctat
cgcttccaagaggaaggtcgtgaactcgaattcattcacaaaaccaaagtcgatgatcct
cctttggctcttcttgcattccaaggtcgagtgcttgccggtgtgggctcgcttcttcga
ctctatgatttgggtatgaagcagctgctccgcaagtgtcaggctcacgttgtccctcac
actattgtcggacttcagactcaagggagtcgaatcatcgtcagtgatgttcgcgatagc
gtgacttacgtcgtctacaagtaccaagagaacgttatgatcccattcgtggatgatact
gttgctcggtggacaacatccacggccatggtggattatgaaactacggcgggtggcgat
aagtttggcaacatttggttgcttcgctgccccacaaaattctcagaggaagctgacgag
gatggctctggagcccatctccttcatgagagaggctaccttcaaggcacgccgaaccgg
ctcgatctcatggttcattactatgtgcaagacattcccactggaatccacaaaacgcaa
ctggttgctggtggtcgagacattctggtgtggactggctttcaaggaaccattggcatg
tttgtgccctttgtcagtcgcgaggatgtcgacttcttccaaagtcttgagatgcagctc
gcctcccaaacccctcctctcgctggccgggatcatctcatctatagaggttactatgcg
ccctcgaaaggtgtcatcgatggtgacttatgtgagatgtacttccttttgcccaatgac
acgaagatgatgattgcggcggaacttgatcgctccgtccgtgaaatcgaacgcaagatc
tcggacatgcgaacgagggtcgcttattga
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